| Toward full peptide sequence coverage by dual fragmentation combining electron-transfer and higher-energy collision dissociation tandem mass spectrometry CK Frese, AFM Altelaar, H van den Toorn, D Nolting, J Griep-Raming, ... Analytical chemistry 84 (22), 9668-9673, 2012 | 315 | 2012 |
| Personalized proteome profiles of healthy and tumor human colon organoids reveal both individual diversity and basic features of colorectal cancer A Cristobal, HWP van den Toorn, M van de Wetering, H Clevers, ... Cell reports 18 (1), 263-274, 2017 | 147 | 2017 |
| Toward an optimized workflow for middle-down proteomics A Cristobal, F Marino, H Post, HWP van den Toorn, S Mohammed, ... Analytical chemistry 89 (6), 3318-3325, 2017 | 146 | 2017 |
| Quantitative and qualitative proteome characteristics extracted from in-depth integrated genomics and proteomics analysis TY Low, S van Heesch, H van den Toorn, P Giansanti, A Cristobal, ... Cell reports 5 (5), 1469-1478, 2013 | 135 | 2013 |
| The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium RG Côté, J Griss, JA Dianes, R Wang, JC Wright, HWP van den Toorn, ... Molecular & Cellular Proteomics 11 (12), 1682-1689, 2012 | 114 | 2012 |
| An augmented multiple-protease-based human phosphopeptide atlas P Giansanti, TT Aye, H van den Toorn, M Peng, B van Breukelen, ... Cell reports 11 (11), 1834-1843, 2015 | 108 | 2015 |
| A serum proteome signature to predict mortality in severe COVID-19 patients F Völlmy, H Van Den Toorn, RZ Chiozzi, O Zucchetti, A Papi, CA Volta, ... Life Science Alliance 4 (9), 2021 | 78 | 2021 |
| Deep proteome profiling of Trichoplax adhaerens reveals remarkable features at the origin of metazoan multicellularity JH Ringrose, HW Van Den Toorn, M Eitel, H Post, P Neerincx, ... Nature communications 4 (1), 1408, 2013 | 62 | 2013 |
| Selectivity in Enrichment of cAMP-dependent Protein Kinase Regulatory Subunits Type I and Type II and Their Interactors Using Modified cAMP Affinity Resins* S TT Aye, S Mohammed, HWP van den Toorn, TAB van Veen, ... Molecular & Cellular Proteomics 8 (5), 1016-1028, 2009 | 60 | 2009 |
| qcML: an exchange format for quality control metrics from mass spectrometry experiments M Walzer, LE Pernas, S Nasso, W Bittremieux, S Nahnsen, ... Molecular & Cellular Proteomics 13 (8), 1905-1913, 2014 | 55 | 2014 |
| Characterization of Biases in Phosphopeptide Enrichment by Ti4+-Immobilized Metal Affinity Chromatography and TiO2 Using a Massive Synthetic Library and … L Matheron, H van den Toorn, AJR Heck, S Mohammed Analytical chemistry 86 (16), 8312-8320, 2014 | 54 | 2014 |
| Ultra acidic strong cation exchange enabling the efficient enrichment of basic phosphopeptides ML Hennrich, HWP van den Toorn, V Groenewold, AJR Heck, ... Analytical chemistry 84 (4), 1804-1808, 2012 | 54 | 2012 |
| Effect of chemical modifications on peptide fragmentation behavior upon electron transfer induced dissociation ML Hennrich, PJ Boersema, H van den Toorn, N Mischerikow, AJR Heck, ... Analytical chemistry 81 (18), 7814-7822, 2009 | 53 | 2009 |
| Discovery and quantification of nonhuman proteins in human milk J Zhu, L Garrigues, H Van den Toorn, B Stahl, AJR Heck Journal of proteome research 18 (1), 225-238, 2018 | 50 | 2018 |
| Single-cell derived tumor organoids display diversity in HLA class I peptide presentation LC Demmers, K Kretzschmar, A Van Hoeck, YE Bar-Epraïm, ... Nature communications 11 (1), 5338, 2020 | 49 | 2020 |
| StatQuant: a post-quantification analysis toolbox for improving quantitative mass spectrometry B van Breukelen, HWP van den Toorn, MM Drugan, AJR Heck Bioinformatics 25 (11), 1472-1473, 2009 | 47 | 2009 |
| Benefits of collisional cross section assisted precursor selection (caps-PASEF) for cross-linking mass spectrometry B Steigenberger, HWP van den Toorn, E Bijl, JF Greisch, O Räther, ... Molecular & Cellular Proteomics 19 (10), 1677-1687, 2020 | 46 | 2020 |
| Monitoring Human Milk β-Casein Phosphorylation and O-Glycosylation Over Lactation Reveals Distinct Differences between the Proteome and Endogenous … KA Dingess, I Gazi, HWP van den Toorn, M Mank, B Stahl, KR Reiding, ... International journal of molecular sciences 22 (15), 8140, 2021 | 33 | 2021 |
| Toward an efficient workflow for the analysis of the human milk peptidome KA Dingess, HWP van den Toorn, M Mank, B Stahl, AJR Heck Analytical and bioanalytical chemistry 411, 1351-1363, 2019 | 33 | 2019 |
| RockerBox: analysis and filtering of massive proteomics search results HWP van den Toorn, J Muñoz, S Mohammed, R Raijmakers, AJR Heck, ... Journal of proteome research 10 (3), 1420-1424, 2011 | 33 | 2011 |
Albert J. R. HeckBiomolecular Mass Spectrometry and Proteomics, Bijvoet Center and Utrecht UniversityVerified email at uu.nl
