Daniel Stekhoven

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Peter BühlmannProfessor of Statistics and Mathematics, ETH ZurichVerified email at stat.math.ethz.ch
Niko BeerenwinkelProfessor of Computational Biology, ETH ZurichVerified email at bsse.ethz.ch
Lars HennigProfessor in Genetics, Swedish Agricultural University, UppsalaVerified email at slu.se
Marloes MaathuisETH ZurichVerified email at stat.math.ethz.ch
Ciurea AdrianVerified email at ciurea.ch
Nora C ToussaintSenior Bioinformatics Scientist, NEXUS, Swiss Federal Institute of Technologies (ETH) ZurichVerified email at nexus.ethz.ch
Mitch Levesque, PhD.Associate Professor, Faculty of Medicine, University of Zurich Hospital, University of ZurichVerified email at usz.ch
Ahrens, ChristianGenomics & Bioinformatics, Agroscope and Swiss Institute of BioinformaticsVerified email at agroscope.admin.ch
Ian SmallARC Centre of Excellence in Plant Energy Biology, The University of Western AustraliaVerified email at uwa.edu.au
Ronan SulpiceLecturer, School of Biological and Chemical Sciences, University of Galway, IrelandVerified email at universityofgalway.ie
Thomas ThurnherrETH ZurichVerified email at bsse.ethz.ch
M QuebatteBiozentrumVerified email at unibas.ch
Katja BaerenfallerGroup lead Molecular AllergologyVerified email at siaf.uzh.ch
Katharine A HowellHDR Course Coordinator, Graduate Research, Edith Cowan UniversityVerified email at ecu.edu.au
Hans-Joachim RuscheweyhBioinformatician, D-BIOL, ETH ZurichVerified email at ethz.ch
Christian BeiselHead Genomics Facility Basel, ETH ZurichVerified email at bsse.ethz.ch
Mark D. RobinsonAssociate Professor of Statistical Genomics, University of ZurichVerified email at imls.uzh.ch
Ermir QeliSwiss Reinsurance Company LtdVerified email at swissre.com
Nicolas StädlerF. Hoffmann-La Roche
Ulrich GoldmannData Scientist at the Research Center for Molecular Medicine, Vienna, AustriaVerified email at cemm.at

Daniel Stekhoven

NEXUS, ETH Zurich, Switzerland

Verified email at nexus.ethz.ch - Homepage

Statistics Machine Learning Computational Biology Genomics Medical Statistics


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MissForest—non-parametric missing value imputation for mixed-type data DJ Stekhoven, P Bühlmann Bioinformatics 28 (1), 112-118, 2012	3147	2012
Package ‘missForest’ DJ Stekhoven, MDJ Stekhoven R package version 1, 2013	281	2013
From hype to reality: data science enabling personalized medicine H Fröhlich, R Balling, N Beerenwinkel, O Kohlbacher, S Kumar, ... BMC medicine 16 (1), 1-15, 2018	270	2018
Systems‐based analysis of Arabidopsis leaf growth reveals adaptation to water deficit K Baerenfaller, C Massonnet, S Walsh, S Baginsky, P Bühlmann, ... Molecular systems biology 8 (1), 606, 2012	215	2012
Tumor necrosis factor α inhibition in radiographic and nonradiographic axial spondyloarthritis: results from a large observational cohort A Ciurea, A Scherer, P Exer, J Bernhard, J Dudler, B Beyeler, R Kissling, ... Arthritis & Rheumatism 65 (12), 3096-3106, 2013	167	2013
Causal stability ranking DJ Stekhoven, I Moraes, G Sveinbjörnsson, L Hennig, MH Maathuis, ... Bioinformatics 28 (21), 2819-2823, 2012	89	2012
Using the missForest package DJ Stekhoven R package, 1-11, 2011	70	2011
Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome U Omasits, M Quebatte, DJ Stekhoven, C Fortes, B Roschitzki, ... Genome research 23 (11), 1916-1927, 2013	61	2013
Bioinformatics for precision oncology J Singer, A Irmisch, HJ Ruscheweyh, F Singer, NC Toussaint, ... Briefings in bioinformatics 20 (3), 778-788, 2019	58	2019
The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support A Irmisch, X Bonilla, S Chevrier, KV Lehmann, F Singer, NC Toussaint, ... Cancer Cell 39 (3), 288-293, 2021	50	2021
Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data E Qeli, U Omasits, S Goetze, DJ Stekhoven, JE Frey, K Basler, ... Journal of proteomics 108, 269-283, 2014	35	2014
Pattern alternating maximization algorithm for missing data in high-dimensional problems. N Städler, DJ Stekhoven, P Bühlmann J. Mach. Learn. Res. 15 (1), 1903-1928, 2014	33	2014
Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism DJ Stekhoven, U Omasits, M Quebatte, C Dehio, CH Ahrens Journal of proteomics 99, 123-137, 2014	30	2014
NGS-pipe: a flexible, easily extendable and highly configurable framework for NGS analysis J Singer, HJ Ruscheweyh, AL Hofmann, T Thurnherr, F Singer, ... Bioinformatics 34 (1), 107-108, 2018	27	2018
Age at symptom onset in ankylosing spondylitis: is there a gender difference? A Ciurea, A Scherer, U Weber, R Neuenschwander, G Tamborrini, P Exer, ... Annals of the rheumatic diseases 73 (10), 1908-1910, 2014	27	2014
Lost in anonymization—A data anonymization reference classification merging legal and technical considerations KN Vokinger, DJ Stekhoven, M Krauthammer Journal of Law, Medicine & Ethics 48 (1), 228-231, 2020	22	2020
SwissMTB: establishing comprehensive molecular cancer diagnostics in Swiss clinics F Singer, A Irmisch, NC Toussaint, L Grob, J Singer, T Thurnherr, ... BMC medical informatics and decision making 18, 1-18, 2018	20	2018
Antimicrobial prophylaxis redosing reduces surgical site infection risk in prolonged duration surgery irrespective of its timing D Bertschi, WP Weber, J Zeindler, D Stekhoven, R Mechera, L Salm, ... World Journal of Surgery 43, 2420-2425, 2019	17	2019
Genomic variant annotation workflow for clinical applications T Thurnherr, F Singer, DJ Stekhoven, N Beerenwinkel F1000Research 5, 1963, 2016	16	2016
Drug screening and genome editing in human pancreatic cancer organoids identifies drug-gene interactions and candidates for off-label therapy CK Hirt, TH Booij, L Grob, P Simmler, NC Toussaint, D Keller, D Taube, ... Cell genomics 2 (2), 100095, 2022	15	2022

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