Aziz Aboobaker

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Damian KaoConsulting BioinformaticianVerified email at janelia.hhmi.org
Mark BlaxterTree of Life programme, Wellcome Sanger InstituteVerified email at sanger.ac.uk
Alvina G LaiUniversity College London | Associate ProfessorVerified email at ucl.ac.uk
Yuliana MihaylovaUniversity of NottinghamVerified email at nottingham.ac.uk
Prasad AbnaveScientist, National Centre For Cell Science (NCCS), PuneVerified email at nccs.res.in
Farah Jaber-HijaziResearch Associate, Institute of Cancer Sciences, University of Glasgow, Glasgow, UKVerified email at glasgow.ac.uk
Nobuyoshi KosakaTokyo medical universityVerified email at tokyo-med.ac.jp
Belen Tejada-RomeroUniversity of OxfordVerified email at zoo.ox.ac.uk
Jordi SolanaOxford Brookes UniversityVerified email at brookes.ac.uk
Georgios KoutsovoulosANSES, Sophia Antipolis Laboratory, Bee Diseases UnitVerified email at anses.fr
Sujai KumarWellcome Sanger Institute, formerly University of EdinburghVerified email at sanger.ac.uk
Pavel TomancakResearch Group Leader at the Max Planck Institute of Molecular Cell Biology and Genetics in DresdenVerified email at mpi-cbg.de
Gerald M. RubinJanelia Research Campus/HHMIVerified email at janelia.hhmi.org
Eric C. LaiMember, Sloan-Kettering InstituteVerified email at mskcc.org
Lewis StevensTree of Life, Wellcome Sanger InstituteVerified email at sanger.ac.uk
Stephane DelmasAssistant Professor, Sorbonne UniversitéVerified email at upmc.fr
Edward J LouisProfessor of Genetics, University of LeicesterVerified email at le.ac.uk
Jordi PapsSenior lecturer, School of Biological Sciences, University of BristolVerified email at bristol.ac.uk
Richard D EmesPVC Research and Innovation, Nottingham Trent UniversityVerified email at ntu.ac.uk
Rachael TarlintonUniversity of NottinghamVerified email at nottingham.ac.uk

Aziz Aboobaker

Professor of Comparative and Functional Genomics, University of Oxford

Verified email at zoo.ox.ac.uk - Homepage

regeneration stem cells ageing evolution of life history traits


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Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development AA Aboobaker, P Tomancak, N Patel, GM Rubin, EC Lai Proceedings of the National Academy of Sciences 102 (50), 18017-18022, 2005	323	2005
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini G Koutsovoulos, S Kumar, DR Laetsch, L Stevens, J Daub, C Conlon, ... Proceedings of the National Academy of Sciences 113 (18), 5053-5058, 2016	244	2016
Use of RNA interference to investigate gene function in the human filarial nematode parasite Brugia malayi AA Aboobaker, ML Blaxter Molecular and biochemical parasitology 129 (1), 41-51, 2003	194	2003
Planarian stem cells: a simple paradigm for regeneration AA Aboobaker Trends in cell biology 21 (5), 304-311, 2011	168	2011
Evidence for a microRNA expansion in the bilaterian ancestor SE Prochnik, DS Rokhsar, AA Aboobaker Development genes and evolution 217, 73-77, 2007	164	2007
Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNA-seq, RNA interference and irradiation approach J Solana, D Kao, Y Mihaylova, F Jaber-Hijazi, S Malla, R Wilson, ... Genome biology 13 (3), 1-23, 2012	160	2012
The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion D Kao, AG Lai, E Stamataki, S Rosic, N Konstantinides, E Jarvis, ... elife 5, e20062, 2016	153	2016
Uncovering the Genome-Wide Transcriptional Responses of the Filamentous Fungus Aspergillus niger to Lignocellulose Using RNA Sequencing S Delmas, ST Pullan, S Gaddipati, M Kokolski, S Malla, MJ Blythe, ... Public Library of Science 8 (8), e1002875, 2012	148	2012
Hox gene loss during dynamic evolution of the nematode cluster AA Aboobaker, ML Blaxter Current Biology 13 (1), 37-40, 2003	141	2003
Telomere maintenance and telomerase activity are differentially regulated in asexual and sexual worms TCJ Tan, R Rahman, F Jaber-Hijazi, DA Felix, C Chen, EJ Louis, ... Proceedings of the National Academy of Sciences 109 (11), 4209-4214, 2012	124	2012
Hox gene evolution in nematodes: novelty conserved A Aboobaker, M Blaxter Current opinion in genetics & development 13 (6), 593-598, 2003	99	2003
SMG-1 and mTORC1 act antagonistically to regulate response to injury and growth in planarians C Gonzalez-Estevez, DA Felix, MD Smith, J Paps, SJ Morley, V James, ... PLoS genetics 8 (3), e1002619, 2012	93	2012
Gtdap-1 promotes autophagy and is required for planarian remodeling during regeneration and starvation C González-Estévez, DA Felix, AA Aboobaker, E Saló Proceedings of the National Academy of Sciences 104 (33), 13373-13378, 2007	90	2007
The TALE Class Homeobox Gene Smed-prep Defines the Anterior Compartment for Head Regeneration DA Felix, AA Aboobaker PLoS genetics 6 (4), e1000915, 2010	80	2010
Early planarian brain regeneration is independent of blastema polarity mediated by the Wnt/β-catenin pathway M Iglesias, M Almuedo-Castillo, AA Aboobaker, E Saló Developmental biology 358 (1), 68-78, 2011	79	2011
A dual platform approach to transcript discovery for the planarian Schmidtea mediterranea to establish RNAseq for stem cell and regeneration biology MJ Blythe, D Kao, S Malla, J Rowsell, R Wilson, D Evans, J Jowett, A Hall, ... PloS one 5 (12), e15617, 2010	76	2010
EvoRegen in animals: time to uncover deep conservation or convergence of adult stem cell evolution and regenerative processes AG Lai, AA Aboobaker Developmental biology 433 (2), 118-131, 2018	68	2018
Efficient transgenesis and annotated genome sequence of the regenerative flatworm model Macrostomum lignano J Wudarski, D Simanov, K Ustyantsev, K De Mulder, M Grelling, ... Nature communications 8 (1), 2120, 2017	67	2017
Epithelial-mesenchymal transition transcription factors control pluripotent adult stem cell migration in vivo in planarians P Abnave, E Aboukhatwa, N Kosaka, J Thompson, MA Hill, AA Aboobaker Development 144 (19), 3440-3453, 2017	64*	2017
Learning impairments induced by glutamate blockade using dizocilpine (MK‐801) in monkeys JA Harder, AA Aboobaker, TC Hodgetts, RM Ridley British Journal of Pharmacology 125 (5), 1013-1018, 1998	63	1998

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