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Benedict Anchang
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Intestinal enteroendocrine lineage cells possess homeostatic and injury-inducible stem cell activity
KS Yan, O Gevaert, GXY Zheng, B Anchang, CS Probert, KA Larkin, ...
Cell stem cell 21 (1), 78-90. e6, 2017
3412017
Progenitor identification and SARS-CoV-2 infection in human distal lung organoids
AA Salahudeen, SS Choi, A Rustagi, J Zhu, V van Unen, SM de la O, ...
Nature 588 (7839), 670-675, 2020
3352020
Wnt secretion is required to maintain high levels of Wnt activity in colon cancer cells
O Voloshanenko, G Erdmann, TD Dubash, I Augustin, M Metzig, G Moffa, ...
Nature communications 4 (1), 2610, 2013
2762013
Mapping lung cancer epithelial-mesenchymal transition states and trajectories with single-cell resolution
LG Karacosta, B Anchang, N Ignatiadis, SC Kimmey, JA Benson, ...
Nature communications 10 (1), 5587, 2019
1782019
Visualization and cellular hierarchy inference of single-cell data using SPADE
B Anchang, TDP Hart, SC Bendall, P Qiu, Z Bjornson, M Linderman, ...
Nature protocols 11 (7), 1264-1279, 2016
1182016
Modeling the temporal interplay of molecular signaling and gene expression by using dynamic nested effects models
B Anchang, MJ Sadeh, J Jacob, A Tresch, MO Vlad, PJ Oefner, R Spang
Proceedings of the National Academy of Sciences 106 (16), 6447-6452, 2009
562009
DRUG-NEM: Optimizing drug combinations using single-cell perturbation response to account for intratumoral heterogeneity
B Anchang, KL Davis, HG Fienberg, BD Williamson, SC Bendall, ...
Proceedings of the National Academy of Sciences 115 (18), E4294-E4303, 2018
482018
p19ARF is a critical mediator of both cellular senescence and an innate immune response associated with MYC inactivation in mouse model of acute leukemia
A Yetil, B Anchang, AM Gouw, SJ Adam, T Zabuawala, R Parameswaran, ...
Oncotarget 6 (6), 3563, 2015
282015
CCAST: a model-based gating strategy to isolate homogeneous subpopulations in a heterogeneous population of single cells
B Anchang, MT Do, X Zhao, SK Plevritis
PLoS computational biology 10 (7), e1003664, 2014
202014
Mitochondrial-nuclear epistasis underlying phenotypic variation in breast cancer pathology
PR Bushel, J Ward, A Burkholder, J Li, B Anchang
Scientific Reports 12 (1), 1393, 2022
112022
Disparate participation by gender of conference attendants in scientific discussions
M Rezaee, A Verde, B Anchang, SA Mattonen, J Garcia-Diaz, ...
Plos one 17 (1), e0262639, 2022
92022
Exact likelihood computation in Boolean networks with probabilistic time delays, and its application in signal network reconstruction
S Dümcke, J Bräuer, B Anchang, R Spang, N Beerenwinkel, A Tresch
Bioinformatics 30 (3), 414-419, 2014
92014
Progenitor identification and SARS-CoV-2 infection in long-term human distal lung organoid cultures (preprint)
AA Salahudeen, SS Choi, A Rustagi, J Zhu, RA Flynn, M Margalef-Català, ...
82020
Mathematical modeling of proliferative immune response initiated by interactions between classical antigen-presenting cells under joint antagonistic IL-2 and IL-4 signaling
K Atitey, B Anchang
Frontiers in molecular biosciences 9, 777390, 2022
62022
ARF: connecting senescence and innate immunity for clearance
AY Kearney, B Anchang, S Plevritis, DW Felsher
Aging (Albany NY) 7 (9), 613, 2015
42015
Wnt secretion is required to maintain high levels of Wnt activity in colon cancer cells. Nat Commun. 2013; 4: 2610
O Voloshanenko, G Erdmann, TD Dubash, I Augustin, M Metzig, G Moffa, ...
4
Visualization, benchmarking and characterization of nested single-cell heterogeneity as dynamic forest mixtures
B Anchang, R Mendez-Giraldez, X Xu, TK Archer, Q Chen, G Hu, ...
Briefings in Bioinformatics 23 (2), bbac017, 2022
32022
Extending the lymphoblastoid cell line model for drug combination pharmacogenomics
AJ Green, B Anchang, FS Akhtari, DM Reif, A Motsinger-Reif
Pharmacogenomics 22 (9), 543-551, 2021
12021
Individualized drug combination based on single-cell drug perturbations
B Anchang, K Davis, H Fienberg, S Bendall, L Karacosta, G Nolan, ...
Cancer Research 78 (13_Supplement), 2275-2275, 2018
12018
Identifying dynamic EMT states and constructing a proteomic EMT landscape of lung cancer using single cell multidimensional analysis
LG Karacosta, B Anchang, S Kimmey, M Rijn, JB Shrager, SC Bendall, ...
Cancer Research 78 (13_Supplement), 4997-4997, 2018
12018
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