Ahmed Mahfouz
Ahmed Mahfouz
Assistant Professor, Leiden University Medical Center
Verified email at lumc.nl - Homepage
Title
Cited by
Cited by
Year
Conserved cell types with divergent features in human versus mouse cortex
RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ...
Nature 573 (7772), 61-68, 2019
5902019
Eleven grand challenges in single-cell data science
D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ...
Genome biology 21 (1), 1-35, 2020
3202020
A comparison of automatic cell identification methods for single-cell RNA sequencing data
T Abdelaal, L Michielsen, D Cats, D Hoogduin, H Mei, MJT Reinders, ...
Genome biology 20 (1), 1-19, 2019
1812019
Fast localization of the optic disc using projection of image features
AE Mahfouz, AS Fahmy
IEEE Transactions on Image Processing 19 (12), 3285-3289, 2010
1412010
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ...
Nature biotechnology 36 (12), 1197-1202, 2018
1382018
Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy
HEKBPFL Nathalie Doorenweerd, Ahmed Mahfouz, Maaike van Putten, Rajaram ...
Scientific Reports 7 (1), 12575, 2017
74*2017
The single-cell eQTLGen consortium
MGP van der Wijst, DH de Vries, HE Groot, G Trynka, CC Hon, MJ Bonder, ...
Elife 9, 2020
712020
Genome-wide coexpression of steroid receptors in the mouse brain: Identifying signaling pathways and functionally coordinated regions
A Mahfouz, BPF Lelieveldt, A Grefhorst, LTCM van Weert, IM Mol, ...
Proceedings of the National Academy of Sciences 113 (10), 2738-2743, 2016
592016
Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings
A Mahfouz, M van de Giessen, L van der Maaten, S Huisman, M Reinders, ...
Methods 73, 79–89, 2014
592014
RNA sequencing data integration reveals an miRNA interactome of osteoarthritis cartilage
RC de Almeida, YFM Ramos, A Mahfouz, W den Hollander, N Lakenberg, ...
Annals of the rheumatic diseases 78 (2), 270-277, 2019
522019
NeuroD factors discriminate mineralocorticoid from glucocorticoid receptor DNA binding in the male rat brain
L van Weert, JC Buurstede, A Mahfouz, PSM Braakhuis, JAE Polman, ...
Endocrinology, 2017
492017
Shared pathways among autism candidate genes determined by co-expression network analysis of the developing human brain transcriptome
A Mahfouz, MN Ziats, OM Rennert, BPF Lelieveldt, MJT Reinders
Journal of Molecular Neuroscience 57 (4), 580-594, 2015
452015
High-dimensional cytometric analysis of colorectal cancer reveals novel mediators of antitumour immunity
NL de Vries, V Van Unen, ME Ijsselsteijn, T Abdelaal, R Van Der Breggen, ...
Gut 69 (4), 691-703, 2020
432020
Hi-C chromatin interaction networks predict co-expression in the mouse cortex
S Babaei, A Mahfouz, M Hulsman, BPF Lelieveldt, J de Ridder, ...
PLoS computational biology 11 (5), e1004221, 2015
432015
Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: a GWAS-based study using the Allen Human Brain Atlas
E Eising, SMH Huisman, A Mahfouz, LS Vijfhuizen, V Anttila, BS Winsvold, ...
Human genetics 135 (4), 425-439, 2016
382016
Ultrafast localization of the optic disc using dimensionality reduction of the search space
A Mahfouz, A Fahmy
Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009, 985-992, 2009
382009
Single-cell RNA sequencing in facioscapulohumeral muscular dystrophy disease etiology and development
A van den Heuvel, A Mahfouz, SL Kloet, J Balog, BGM van Engelen, ...
Human molecular genetics 28 (7), 1064-1075, 2019
312019
Cortical spreading depression causes unique dysregulation of inflammatory pathways in a transgenic mouse model of migraine
E Eising, R Shyti, P AC’t Hoen, LS Vijfhuizen, SMH Huisman, LAM Broos, ...
Molecular neurobiology 54 (4), 2986, 2017
312017
BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome
SMH Huisman, B van Lew, A Mahfouz, N Pezzotti, T Höllt, L Michielsen, ...
Nucl Acids Res, 2017
292017
Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics
E Taskesen, SMH Huisman, A Mahfouz, JH Krijthe, J De Ridder, ...
Scientific reports 6 (1), 1-14, 2016
292016
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Articles 1–20