Jaroslav Bendl
Jaroslav Bendl
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PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations
J Bendl, J Stourac, O Salanda, A Pavelka, ED Wieben, J Zendulka, ...
PLoS computational biology 10 (1), e1003440, 2014
The Mount Sinai cohort of large-scale genomic, transcriptomic and proteomic data in Alzheimer's disease
M Wang, ND Beckmann, P Roussos, E Wang, X Zhou, Q Wang, C Ming, ...
Scientific data 5 (1), 1-16, 2018
Genome-wide analyses of ADHD identify 27 risk loci, refine the genetic architecture and implicate several cognitive domains
D Demontis, GB Walters, G Athanasiadis, R Walters, K Therrien, ...
Nature genetics 55 (2), 198-208, 2023
CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder
GE Hoffman, J Bendl, G Voloudakis, KS Montgomery, L Sloofman, ...
Scientific data 6 (1), 180, 2019
PredictSNP2: a unified platform for accurately evaluating SNP effects by exploiting the different characteristics of variants in distinct genomic regions
J Bendl, M Musil, J Štourač, J Zendulka, J Damborský, J Brezovský
PLoS computational biology 12 (5), e1004962, 2016
An atlas of chromatin accessibility in the adult human brain
JF Fullard, ME Hauberg, J Bendl, G Egervari, MD Cirnaru, SM Reach, ...
Genome research 28 (8), 1243-1252, 2018
FireProt: energy-and evolution-based computational design of thermostable multiple-point mutants
D Bednar, K Beerens, E Sebestova, J Bendl, S Khare, R Chaloupkova, ...
PLoS computational biology 11 (11), e1004556, 2015
Integration of Alzheimer’s disease genetics and myeloid genomics identifies disease risk regulatory elements and genes
G Novikova, M Kapoor, J Tcw, EM Abud, AG Efthymiou, SX Chen, ...
Nature communications 12 (1), 1610, 2021
FireProt: web server for automated design of thermostable proteins
M Musil, J Stourac, J Bendl, J Brezovsky, Z Prokop, J Zendulka, ...
Nucleic acids research 45 (W1), W393-W399, 2017
Common genetic variation influencing human white matter microstructure
B Zhao, T Li, Y Yang, X Wang, T Luo, Y Shan, Z Zhu, D Xiong, ...
Science 372 (6548), eabf3736, 2021
HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering
J Bendl, J Stourac, E Sebestova, O Vavra, M Musil, J Brezovsky, ...
Nucleic acids research 44 (W1), W479-W487, 2016
Genetics of the human microglia regulome refines Alzheimer’s disease risk loci
R Kosoy, JF Fullard, B Zeng, J Bendl, P Dong, S Rahman, SP Kleopoulos, ...
Nature genetics 54 (8), 1145-1154, 2022
Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses
TD Als, MI Kurki, J Grove, G Voloudakis, K Therrien, E Tasanko, ...
Nature medicine 29 (7), 1832-1844, 2023
Common variants contribute to intrinsic human brain functional networks
B Zhao, T Li, SM Smith, D Xiong, X Wang, Y Yang, T Luo, Z Zhu, Y Shan, ...
Nature Genetics 54 (4), 508-517, 2022
Common schizophrenia risk variants are enriched in open chromatin regions of human glutamatergic neurons
ME Hauberg, J Creus-Muncunill, J Bendl, A Kozlenkov, B Zeng, C Corwin, ...
Nature communications 11 (1), 5581, 2020
Computer-assisted engineering of the synthetic pathway for biodegradation of a toxic persistent pollutant
NP Kurumbang, P Dvorak, J Bendl, J Brezovsky, Z Prokop, J Damborsky
ACS synthetic biology 3 (3), 172-181, 2014
Multi-ancestry eQTL meta-analysis of human brain identifies candidate causal variants for brain-related traits
B Zeng, J Bendl, R Kosoy, JF Fullard, GE Hoffman, P Roussos
Nature genetics 54 (2), 161-169, 2022
Identification of shared and differentiating genetic architecture for autism spectrum disorder, attention-deficit hyperactivity disorder and case subgroups
M Mattheisen, J Grove, TD Als, J Martin, G Voloudakis, S Meier, ...
Nature Genetics 54 (10), 1470-1478, 2022
Sex differences in the human brain transcriptome of cases with schizophrenia
GE Hoffman, Y Ma, KS Montgomery, J Bendl, MK Jaiswal, A Kozlenkov, ...
Biological psychiatry 91 (1), 92-101, 2022
Functional interpretation of genetic variants using deep learning predicts impact on chromatin accessibility and histone modification
GE Hoffman, J Bendl, K Girdhar, EE Schadt, P Roussos
Nucleic acids research 47 (20), 10597-10611, 2019
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