| Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 16495 | 2019 |
| A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses RT Jones, MS Robeson, CL Lauber, M Hamady, R Knight, N Fierer The ISME journal 3 (4), 442-453, 2009 | 1229 | 2009 |
| Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil N Fierer, M Breitbart, J Nulton, P Salamon, C Lozupone, R Jones, ... Applied and environmental microbiology 73 (21), 7059-7066, 2007 | 660 | 2007 |
| RESCRIPt: Reproducible sequence taxonomy reference database management MS Robeson, DR O’Rourke, BD Kaehler, M Ziemski, MR Dillon, JT Foster, ... PLoS computational biology 17 (11), e1009581, 2021 | 510 | 2021 |
| Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants G Bonito, H Reynolds, MS Robeson, J Nelson, BP Hodkinson, G Tuskan, ... Molecular Ecology 23 (13), 3356-3370, 2014 | 296 | 2014 |
| PyCogent: a toolkit for making sense from sequence R Knight, P Maxwell, A Birmingham, J Carnes, JG Caporaso, BC Easton, ... Genome biology 8, 1-16, 2007 | 232 | 2007 |
| Global distribution of Polaromonas phylotypes-evidence for a highly successful dispersal capacity JL Darcy, RC Lynch, AJ King, MS Robeson, SK Schmidt PLoS One 6 (8), e23742, 2011 | 159 | 2011 |
| Multi-omics data integration considerations and study design for biological systems and disease S Graw, K Chappell, CL Washam, A Gies, J Bird, MS Robeson, SD Byrum Molecular omics 17 (2), 170-185, 2021 | 138 | 2021 |
| Seasonal Shifts in Diet and Gut Microbiota of the American Bison (Bison bison). GT Bergmann, JM Craine, MS Robeson, N Fierer PloS one 10 (11), e0142409, 2015 | 131 | 2015 |
| Characterizing microbial communities through space and time A Gonzalez, A King, MS Robeson II, S Song, A Shade, JL Metcalf, ... Current Opinion in Biotechnology 23 (3), 431-436, 2012 | 129 | 2012 |
| Soil CO2 flux and photoautotrophic community composition in high‐elevation, ‘barren’ soil KR Freeman, MY Pescador, SC Reed, EK Costello, MS Robeson, ... Environmental microbiology 11 (3), 674-686, 2009 | 111 | 2009 |
| Functional shifts in unvegetated, perhumid, recently-deglaciated soils do not correlate with shifts in soil bacterial community composition SR Sattin, CC Cleveland, E Hood, SC Reed, AJ King, SK Schmidt, ... The Journal of Microbiology 47, 673-681, 2009 | 107 | 2009 |
| Assessing the utility of metabarcoding for diet analyses of the omnivorous wild pig (Sus scrofa) MS Robeson, K Khanipov, G Golovko, SM Wisely, MD White, ... Ecology and Evolution 8 (1), 185-196, 2018 | 93 | 2018 |
| Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups K Abram, Z Udaondo, C Bleker, V Wanchai, TM Wassenaar, MS Robeson, ... Communications Biology 4 (1), 117, 2021 | 91* | 2021 |
| Microbial community composition and diversity in Caspian Sea sediments N Mahmoudi, MS Robeson II, HF Castro, JL Fortney, SM Techtmann, ... FEMS Microbiology Ecology 1 (91), 1-11, 2015 | 91 | 2015 |
| Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes AŞ Andrei, MS Robeson II, A Baricz, C Coman, V Muntean, A Ionescu, ... ISME, 2015 | 90 | 2015 |
| Phylogeography of microbial phototrophs in the dry valleys of the high Himalayas and Antarctica SK Schmidt, RC Lynch, AJ King, D Karki, MS Robeson, L Nagy, ... Proceedings of the Royal Society B: Biological Sciences 278 (1706), 702, 2011 | 88 | 2011 |
| Soil rotifer communities are extremely diverse globally but spatially autocorrelated locally MS Robeson, AJ King, KR Freeman, CW Birky Jr, AP Martin, SK Schmidt Proceedings of the National Academy of Sciences 108 (11), 4406-4410, 2011 | 84 | 2011 |
| Insights and inferences about integron evolution from genomic data DR Nemergut, MS Robeson, RF Kysela, AP Martin, SK Schmidt, R Knight BMC genomics 9, 1-12, 2008 | 84 | 2008 |
| Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment CM Timm, AG Campbell, SM Utturkar, SR Jun, RE Parales, WA Tan, ... Frontiers in microbiology 6, 1118, 2015 | 72 | 2015 |
S K SchmidtProfessor of Biology, University of Colorado, BoulderVerified email at colorado.edu
