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Weihua Zheng
Weihua Zheng
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Year
AWSEM-MD: protein structure prediction using coarse-grained physical potentials and bioinformatically based local structure biasing
A Davtyan, NP Schafer, W Zheng, C Clementi, PG Wolynes, GA Papoian
The Journal of Physical Chemistry B 116 (29), 8494-8503, 2012
3172012
Exploring the aggregation free energy landscape of the amyloid-β protein (1–40)
W Zheng, MY Tsai, M Chen, PG Wolynes
Proceedings of the National Academy of Sciences 113 (42), 11835-11840, 2016
1312016
Simulating replica exchange simulations of protein folding with a kinetic network model
W Zheng, M Andrec, E Gallicchio, RM Levy
Proceedings of the National Academy of Sciences 104 (39), 15340-15345, 2007
1242007
Predictive energy landscapes for protein–protein association
W Zheng, NP Schafer, A Davtyan, GA Papoian, PG Wolynes
Proceedings of the National Academy of Sciences 109 (47), 19244-19249, 2012
1232012
Exploring the free energy landscape of nucleosomes
B Zhang, W Zheng, GA Papoian, PG Wolynes
Journal of the American Chemical Society 138 (26), 8126-8133, 2016
1182016
Comparing the aggregation free energy landscapes of amyloid beta (1–42) and amyloid beta (1–40)
W Zheng, MY Tsai, PG Wolynes
Journal of the American Chemical Society 139 (46), 16666-16676, 2017
1022017
Electrostatics, structure prediction, and the energy landscapes for protein folding and binding
MY Tsai, W Zheng, D Balamurugan, NP Schafer, BL Kim, MS Cheung, ...
Protein Science 25 (1), 255-269, 2016
912016
Frustration in the energy landscapes of multidomain protein misfolding
W Zheng, NP Schafer, PG Wolynes
Proceedings of the National Academy of Sciences, 2013
882013
Molecular stripping in the NF-κB/IκB/DNA genetic regulatory network
DA Potoyan, W Zheng, EA Komives, PG Wolynes
Proceedings of the National Academy of Sciences 113 (1), 110-115, 2016
862016
Learning to fold proteins using energy landscape theory
NP Schafer, BL Kim, W Zheng, PG Wolynes
Israel journal of chemistry 54 (8‐9), 1311-1337, 2014
772014
Insights into the dynamics of HIV-1 protease: a kinetic network model constructed from atomistic simulations
N Deng, W Zheng, E Gallicchio, RM Levy
Journal of the American Chemical Society 133 (24), 9387-9394, 2011
592011
Kinetic network study of the diversity and temperature dependence of trp-cage folding pathways: Combining transition path theory with stochastic simulations
W Zheng, E Gallicchio, N Deng, M Andrec, RM Levy
The Journal of Physical Chemistry B 115 (6), 1512-1523, 2011
572011
Molecular mechanism of facilitated dissociation of Fis protein from DNA
MY Tsai, B Zhang, W Zheng, PG Wolynes
Journal of the American Chemical Society 138 (41), 13497-13500, 2016
532016
Free energy landscapes for initiation and branching of protein aggregation
W Zheng, NP Schafer, PG Wolynes
Proceedings of the National Academy of Sciences 110 (51), 20515-20520, 2013
472013
Simple continuous and discrete models for simulating replica exchange simulations of protein folding
W Zheng, M Andrec, E Gallicchio, RM Levy
The Journal of Physical Chemistry B 112 (19), 6083-6093, 2008
432008
The aggregation free energy landscapes of polyglutamine repeats
M Chen, MY Tsai, W Zheng, PG Wolynes
Journal of the American Chemical Society 138 (46), 15197-15203, 2016
412016
Thermopower and thermal conductivity of superconducting perovskite MgCNi3
SY Li, WQ Mo, M Yu, WH Zheng, CH Wang, YM Xiong, R Fan, HS Yang, ...
Physical Review B 65 (6), 064534, 2002
402002
Protein folding and structure prediction from the ground up: The atomistic associative memory, water mediated, structure and energy model
M Chen, X Lin, W Zheng, JN Onuchic, PG Wolynes
The journal of physical chemistry B 120 (33), 8557-8565, 2016
382016
Spin-cluster effect and lattice-deformation-induced Kondo effect, spin-glass freezing, and strong phonon scattering in La0.7Cab0.3Mn1-xCrxO3
BM Wu, B Li, WH Zhen, M Ausloos, YL Du, JF Fagnard, P Vanderbemden
Journal of applied physics 97 (10), 103908-103908-6, 2005
352005
Energy landscapes of a mechanical prion and their implications for the molecular mechanism of long-term memory
M Chen, W Zheng, PG Wolynes
Proceedings of the National Academy of Sciences 113 (18), 5006-5011, 2016
342016
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Articles 1–20