Follow
Antonín Pavelka
Antonín Pavelka
Verified email at fi.muni.cz
Title
Cited by
Cited by
Year
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures
E Chovancova, A Pavelka, P Benes, O Strnad, J Brezovsky, B Kozlikova, ...
Public Library of Science 8 (10), e1002708, 2012
11772012
PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations
J Bendl, J Stourac, O Salanda, A Pavelka, ED Wieben, J Zendulka, ...
PLoS computational biology 10 (1), e1003440, 2014
7592014
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories
A Jurcik, D Bednar, J Byska, SM Marques, K Furmanova, L Daniel, ...
Bioinformatics 34 (20), 3586-3588, 2018
2942018
HotSpot Wizard: a web server for identification of hot spots in protein engineering
A Pavelka, E Chovancova, J Damborsky
Nucleic acids research 37 (suppl_2), W376-W383, 2009
2362009
Haloalkane dehalogenases: biotechnological applications
T Koudelakova, S Bidmanova, P Dvorak, A Pavelka, R Chaloupkova, ...
Biotechnology journal 8 (1), 32-45, 2013
1892013
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures
B Kozlikova, E Sebestova, V Sustr, J Brezovsky, O Strnad, L Daniel, ...
Bioinformatics 30 (18), 2684-2685, 2014
1642014
CAVER: algorithms for analyzing dynamics of tunnels in macromolecules
A Pavelka, E Sebestova, B Kozlikova, J Brezovsky, J Sochor, ...
IEEE/ACM transactions on computational biology and bioinformatics 13 (3 …, 2015
1432015
Software tools for identification, visualization and analysis of protein tunnels and channels
J Brezovsky, E Chovancova, A Gora, A Pavelka, L Biedermannova, ...
Biotechnology advances 31 (1), 38-49, 2013
1172013
MMTF—an efficient file format for the transmission, visualization, and analysis of macromolecular structures
AR Bradley, AS Rose, A Pavelka, Y Valasatava, JM Duarte, A Prlić, ...
PLoS computational biology 13 (6), e1005575, 2017
522017
Expansion of Access Tunnels and Active‐Site Cavities Influence Activity of Haloalkane Dehalogenases in Organic Cosolvents
V Stepankova, M Khabiri, J Brezovsky, A Pavelka, J Sykora, M Amaro, ...
ChemBioChem 14 (7), 890-897, 2013
382013
Damborsky, J1: CAS: 528: DC% 2BC2cXjtFagsrs% 3D: PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations. vol. 10, pp. e1003440
J Bendl, J Stourac, O Salanda, A Pavelka, ED Wieben, J Zendulka, ...
PLoS Comput Biol, 2014
22014
Bioinformatics tools for the analysis of macromolecular structures
A Pavelka
Ph. D Thesis, 2016
12016
Expansion of Access Tunnels and Active-Site Cavities Influence Activity of Haloalkane Dehalogenases in Organic Cosolvents.
V Štěpánková, M Khabiri, J Brezovský, A Pavelka, J Sykora, M Amaro, ...
HALOALKANE DEHALOGENASES IN NON-CONVENTIONAL REACTION MEDIA 14 (7), 79, 2013
12013
CAVER 3.0
E Chovancová, A Pavelka, P Beneš, O Strnad, J Brezovský, B Kozlíková, ...
12011
Two faces of the antimicrobial peptides and their relevance to burn wound infection
V Váňa, B Lipový, L Vacek, A Pavelka, L Janda, J Holoubek
Burns: journal of the International Society for Burn Injuries, S0305-4179 …, 2024
2024
Antibakteriální katelicidiny: naděje nebo slepá cesta k náhradě antibiotik?
L Janda, A Pavelka, B Lipový, Š Kobzová, L Vacek
2023
PredictSNP 1.0
J Bendl, J Štourač, O Salanda, A Pavelka, ED Wieben, J Zendulka, ...
2013
CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures
E Šebestová, A Pavelka, P Beneš, O Strnad, J Brezovský, B Kozlíková, ...
2012
Development of geometrical methods for protein engineering and analysis of protein structures
A Pavelka
Masarykova univerzita, Fakulta informatiky, 2012
2012
The effects of CYP2D6 polymorphisms on the paroxetine metabolization
E Pindurová, A Žourková, I Palčíková, A Pavelka, J Juřica
2011
The system can't perform the operation now. Try again later.
Articles 1–20