Diego Mauricio Riaño Pachón

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Bernd Müller-RöberProfessor, University of PotsdamVerified email at uni-potsdam.de
Gustavo H GoldmanFaculdade de Ciências Farmacêuticas de Ribeirão Preto, Universidade de São PauloVerified email at usp.br
Flavia Vischi WinckUniversidade de São PauloVerified email at cena.usp.br
Birgit KerstenThünen Institute of Forest GeneticsVerified email at thuenen.de
Ingo DreyerUniversidad de Talca, ChileVerified email at upm.es
Samuel ArvidssonTeam leader Bioinformatics, LGC Biosearch TechnologiesVerified email at lgcgroup.com
Renato A. Corrêa dos SantosUniversity of São PauloVerified email at usp.br
Silvia RestrepoUniversidad de los AndesVerified email at uniandes.edu.co
Juliana Velasco de Castro OliveiraLaboratório Nacional de BiorrenováveisVerified email at bioetanol.org.br
Stefan A RensingProfessor, University of FreiburgVerified email at cup.uni-freiburg.de
Paulino PérezColegio de PostgraduadosVerified email at colpos.mx
Renato VicentiniAssistant Professor, University of Campinas (UNICAMP)Verified email at unicamp.br
Fabio SquinaUniversidade de SorocabaVerified email at prof.uniso.br
Lucia MattielloPost doctoral researcherVerified email at lgf.ib.unicamp.br
Salma BalazadehLeiden UniversityVerified email at biology.leidenuniv.nl
Miroslaw KwasniewskiCentre for Bioinformatics and Data Analysis, Medical University of BialystokVerified email at umb.edu.pl
Neil BrownUniversity of BathVerified email at bath.ac.uk
Adriana Franco Paes LemeGroup Leader and Head of Proteomics, Brazilian Biosciences National Laboratory, LNBio, CNPEMVerified email at lnbio.cnpem.br
Marina C. M. Martins Soldiin Press - Consultoria e Comunicação CientíficaVerified email at usp.br
Igor PolikarpovProfessor TitularVerified email at ifsc.usp.br

Diego Mauricio Riaño Pachón

Other namesDiego Mauricio Riano-Pachon

Assistant Professor, Center for Nuclear Energy in Agriculture, University of São Paulo

Verified email at cena.usp.br - Homepage

computational biology gene regulatory networks bioinformatics genomics genome annotation


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The Chlamydomonas genome reveals the evolution of key animal and plant functions SS Merchant, SE Prochnik, O Vallon, EH Harris, SJ Karpowicz, ... Science 318 (5848), 245-250, 2007	2767	2007
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants JA Banks, T Nishiyama, M Hasebe, JL Bowman, M Gribskov, ... science 332 (6032), 960-963, 2011	826	2011
PlnTFDB: updated content and new features of the plant transcription factor database P Pérez-Rodríguez, DM Riano-Pachon, LGG Corrêa, SA Rensing, ... Nucleic acids research 38 (suppl_1), D822-D827, 2010	681	2010
QuantPrime–a flexible tool for reliable high-throughput primer design for quantitative PCR S Arvidsson, M Kwasniewski, DM Riaño-Pachón, B Mueller-Roeber BMC bioinformatics 9, 1-15, 2008	550	2008
Pan genome of the phytoplankton Emiliania underpins its global distribution BA Read, J Kegel, MJ Klute, A Kuo, SC Lefebvre, F Maumus, C Mayer, ... Nature 499 (7457), 209-213, 2013	473	2013
PlnTFDB: an integrative plant transcription factor database DM Riaño-Pachón, S Ruzicic, I Dreyer, B Mueller-Roeber BMC bioinformatics 8 (1), 1-10, 2007	436	2007
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus RP De Vries, R Riley, A Wiebenga, G Aguilar-Osorio, S Amillis, ... Genome biology 18, 1-45, 2017	384	2017
Transcription factors regulating leaf senescence in Arabidopsis thaliana S Balazadeh, DM Riaño‐Pachón, B Mueller‐Roeber Plant biology 10, 63-75, 2008	324	2008
The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes LGG Corrêa, DM Riaño-Pachón, CG Schrago, R Vicentini dos Santos, ... PloS one 3 (8), e2944, 2008	290	2008
Genome-wide analysis of ABA-responsive elements ABRE and CE3 reveals divergent patterns in Arabidopsis and rice JL Gómez-Porras, DM Riaño-Pachón, I Dreyer, JE Mayer, ... BMC genomics 8, 1-13, 2007	186	2007
Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity D Lang, B Weiche, G Timmerhaus, S Richardt, DM Riano-Pachon, ... Genome Biology and Evolution 2, 488-503, 2010	178	2010
Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit … J Rohrmann, T Tohge, R Alba, S Osorio, C Caldana, R McQuinn, ... The Plant Journal 68 (6), 999-1013, 2011	134	2011
Insights into immune responses in oral cancer through proteomic analysis of saliva and salivary extracellular vesicles FV Winck, AC Prado Ribeiro, R Ramos Domingues, LY Ling, ... Scientific reports 5 (1), 16305, 2015	107	2015
Green transcription factors: a Chlamydomonas overview DM Riano-Pachon, LGG Corrêa, R Trejos-Espinosa, B Mueller-Roeber Genetics 179 (1), 31-39, 2008	106	2008
Molecular evolution of slow and quick anion channels (SLACs and QUACs/ALMTs) I Dreyer, JL Gomez-Porras, DM Riaño-Pachón, R Hedrich, D Geiger Frontiers in plant science 3, 263, 2012	105	2012
Phylogenetic Analysis of K⁺ Transporters in Bryophytes, Lycophytes, and Flowering Plants Indicates a Specialization of Vascular Plants JL Gomez-Porras, DM Riaño-Pachón, B Benito, R Haro, K Sklodowski, ... Frontiers in plant science 3, 167, 2012	89	2012
Draft genome sequencing of the sugarcane hybrid SP80-3280 DM Riaño-Pachón, L Mattiello F1000Research 6, 2017	66	2017
Genome‐wide transcriptome analysis of Aspergillus fumigatus exposed to osmotic stress reveals regulators of osmotic and cell wall stresses that are SakAHOG1 and MpkC dependent L Pereira Silva, P Alves de Castro, TF Dos Reis, MH Paziani, ... Cellular Microbiology 19 (4), e12681, 2017	61	2017
On and Under the Skin: Emerging Basidiomycetous Yeast Infections Caused by Trichosporon Species M Mariné, NA Brown, DM Riaño-Pachón, GH Goldman PLoS pathogens 11 (7), e1004982, 2015	57	2015
Physiological and transcriptional analyses of developmental stages along sugarcane leaf L Mattiello, DM Riaño-Pachón, MCM Martins, LP da Cruz, D Bassi, ... BMC plant biology 15 (1), 1-21, 2015	55	2015

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