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Loren Hauser
Loren Hauser
Digital Infuzion
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Year
Prodigal: prokaryotic gene recognition and translation initiation site identification
D Hyatt, GL Chen, PF LoCascio, ML Land, FW Larimer, LJ Hauser
BMC bioinformatics 11, 1-11, 2010
87372010
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
G Rocap, FW Larimer, J Lamerdin, S Malfatti, P Chain, NA Ahlgren, ...
Nature 424 (6952), 1042-1047, 2003
12802003
Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris
FW Larimer, P Chain, L Hauser, J Lamerdin, S Malfatti, L Do, ML Land, ...
Nature biotechnology 22 (1), 55-61, 2004
8612004
Insights from 20 years of bacterial genome sequencing
M Land, L Hauser, SR Jun, I Nookaew, MR Leuze, TH Ahn, T Karpinets, ...
Functional & integrative genomics 15, 141-161, 2015
8572015
Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
PSG Chain, E Carniel, FW Larimer, J Lamerdin, PO Stoutland, ...
Proceedings of the National Academy of Sciences 101 (38), 13826-13831, 2004
7972004
The genome of a motile marine Synechococcus
B Palenik, B Brahamsha, FW Larimer, M Land, L Hauser, P Chain, ...
Nature 424 (6952), 1037-1042, 2003
7782003
Complete Genome Sequence of the Ammonia-Oxidizing Bacterium and Obligate Chemolithoautotroph Nitrosomonas europaea
P Chain, J Lamerdin, F Larimer, W Regala, V Lao, M Land, L Hauser, ...
Journal of bacteriology 185 (9), 2759-2773, 2003
6792003
Gene and translation initiation site prediction in metagenomic sequences
D Hyatt, PF LoCascio, LJ Hauser, EC Uberbacher
Bioinformatics 28 (17), 2223-2230, 2012
5072012
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility
PSG Chain, VJ Denef, KT Konstantinidis, LM Vergez, L Agulló, VL Reyes, ...
Proceedings of the National Academy of Sciences 103 (42), 15280-15287, 2006
4142006
Enigmatic, ultrasmall, uncultivated Archaea
BJ Baker, LR Comolli, GJ Dick, LJ Hauser, D Hyatt, BD Dill, ML Land, ...
Proceedings of the National Academy of Sciences 107 (19), 8806-8811, 2010
3492010
The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri
SA Frese, AK Benson, GW Tannock, DM Loach, J Kim, M Zhang, PL Oh, ...
PLoS genetics 7 (2), e1001314, 2011
3422011
Mechanisms of thermal adaptation revealed from the genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii
NFW Saunders, T Thomas, PMG Curmi, JS Mattick, E Kuczek, R Slade, ...
Genome research 13 (7), 1580-1588, 2003
3192003
Targeted access to the genomes of low-abundance organisms in complex microbial communities
M Podar, CB Abulencia, M Walcher, D Hutchison, K Zengler, JA Garcia, ...
Applied and environmental microbiology 73 (10), 3205-3214, 2007
2852007
Genome of the Epsilonproteobacterial Chemolithoautotroph Sulfurimonas denitrificans
SM Sievert, KM Scott, MG Klotz, PSG Chain, LJ Hauser, J Hemp, ...
Applied and environmental microbiology 74 (4), 1145-1156, 2008
2652008
Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment
JM Norton, MG Klotz, LY Stein, DJ Arp, PJ Bottomley, PSG Chain, ...
Applied and environmental microbiology 74 (11), 3559-3572, 2008
2472008
Genome Sequence of the Chemolithoautotrophic Nitrite-Oxidizing Bacterium Nitrobacter winogradskyi Nb-255
SR Starkenburg, PSG Chain, LA Sayavedra-Soto, L Hauser, ML Land, ...
Applied and environmental microbiology 72 (3), 2050-2063, 2006
2392006
Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing “Leptospirillum rubarum”(Group II) and “Leptospirillum ferrodiazotrophum”(Group III) bacteria in …
DSA Goltsman, VJ Denef, SW Singer, NC VerBerkmoes, M Lefsrud, ...
Applied and environmental microbiology 75 (13), 4599-4615, 2009
2182009
The Genome Sequence of Psychrobacter arcticus 273-4, a Psychroactive Siberian Permafrost Bacterium, Reveals Mechanisms for Adaptation to Low-Temperature …
HL Ayala-del-Río, PS Chain, JJ Grzymski, MA Ponder, N Ivanova, ...
Applied and environmental microbiology 76 (7), 2304-2312, 2010
2132010
Whole‐genome analysis of the ammonia‐oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation
LY Stein, DJ Arp, PM Berube, PSG Chain, L Hauser, MSM Jetten, ...
Environmental microbiology 9 (12), 2993-3007, 2007
2012007
The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation
MA Allen, FM Lauro, TJ Williams, D Burg, KS Siddiqui, D De Francisci, ...
The ISME journal 3 (9), 1012-1035, 2009
1962009
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