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Alexander R Pico
Alexander R Pico
Gladstone Institutes
Verified email at gladstone.ucsf.edu - Homepage
Title
Cited by
Cited by
Year
Integration of biological networks and gene expression data using Cytoscape
MS Cline, M Smoot, E Cerami, A Kuchinsky, N Landys, C Workman, ...
Nature protocols 2 (10), 2366-2382, 2007
26422007
Glioma Groups Based on 1p/19q, IDH, and TERT Promoter Mutations in Tumors
JE Eckel-Passow, DH Lachance, AM Molinaro, KM Walsh, PA Decker, ...
New England Journal of Medicine 372 (26), 2499-2508, 2015
18962015
A travel guide to Cytoscape plugins
R Saito, ME Smoot, K Ono, J Ruscheinski, PL Wang, S Lotia, AR Pico, ...
Nature methods 9 (11), 1069-1076, 2012
14282012
Cytoscape automation: empowering workflow-based network analysis
D Otasek, JH Morris, J Bouças, AR Pico, B Demchak
Genome biology 20, 1-15, 2019
8712019
WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research
DN Slenter, M Kutmon, K Hanspers, A Riutta, J Windsor, N Nunes, ...
Nucleic acids research 46 (D1), D661-D667, 2018
8072018
WikiPathways: pathway editing for the people
AR Pico, T Kelder, MP Van Iersel, K Hanspers, BR Conklin, C Evelo
PLoS biology 6 (7), e184, 2008
7012008
Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage
JA Wamstad, JM Alexander, RM Truty, A Shrikumar, F Li, KE Eilertson, ...
Cell 151 (1), 206-220, 2012
6272012
WikiPathways: building research communities on biological pathways
T Kelder, MP Van Iersel, K Hanspers, M Kutmon, BR Conklin, CT Evelo, ...
Nucleic acids research 40 (D1), D1301-D1307, 2012
6102012
Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility
M Wrensch, RB Jenkins, JS Chang, RF Yeh, Y Xiao, PA Decker, ...
Nature genetics 41 (8), 905-908, 2009
5622009
Crystal structure of Hck in complex with a Src family–selective tyrosine kinase inhibitor
T Schindler, F Sicheri, A Pico, A Gazit, A Levitzki, J Kuriyan
Molecular cell 3 (5), 639-648, 1999
5311999
WikiPathways: capturing the full diversity of pathway knowledge
M Kutmon, A Riutta, N Nunes, K Hanspers, EL Willighagen, A Bohler, ...
Nucleic acids research 44 (D1), D488-D494, 2016
4672016
WikiPathways: connecting communities
M Martens, A Ammar, A Riutta, A Waagmeester, DN Slenter, K Hanspers, ...
Nucleic acids research 49 (D1), D613-D621, 2021
4432021
PathVisio 3: an extendable pathway analysis toolbox
M Kutmon, MP van Iersel, A Bohler, T Kelder, N Nunes, AR Pico, CT Evelo
PLoS computational biology 11 (2), e1004085, 2015
4232015
Presenting and exploring biological pathways with PathVisio
MP van Iersel, T Kelder, AR Pico, K Hanspers, S Coort, BR Conklin, ...
BMC bioinformatics 9 (1), 1-9, 2008
4182008
Structure of the RCK domain from the E. coli K+ channel and demonstration of its presence in the human BK channel
Y Jiang, A Pico, M Cadene, BT Chait, R MacKinnon
Neuron 29 (3), 593-601, 2001
3912001
Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983. e31, 2019
3772019
Structure of the human BK channel Ca2+-activation apparatus at 3.0 Å resolution
P Yuan, MD Leonetti, AR Pico, Y Hsiung, R MacKinnon
Science 329 (5988), 182-186, 2010
3372010
GenMAPP 2: new features and resources for pathway analysis
N Salomonis, K Hanspers, AC Zambon, K Vranizan, SC Lawlor, ...
BMC bioinformatics 8, 1-12, 2007
3202007
Proteogenomic and metabolomic characterization of human glioblastoma
LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ...
Cancer cell 39 (4), 509-528. e20, 2021
3012021
GO-Elite: a flexible solution for pathway and ontology over-representation
AC Zambon, S Gaj, I Ho, K Hanspers, K Vranizan, CT Evelo, BR Conklin, ...
Bioinformatics 28 (16), 2209-2210, 2012
2902012
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