Paweł Wojciechowski
Paweł Wojciechowski
Institute of Computing Science, Poznan University of Technology
Verified email at cs.put.poznan.pl
Title
Cited by
Cited by
Year
Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
J Blazewicz, W Frohmberg, M Kierzynka, E Pesch, P Wojciechowski
BMC bioinformatics 12 (1), 1-17, 2011
732011
G-MSA—A GPU-based, fast and accurate algorithm for multiple sequence alignment
J Blazewicz, W Frohmberg, M Kierzynka, P Wojciechowski
Journal of Parallel and Distributed Computing 73 (1), 32-41, 2013
492013
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling
K Świtońska, WJ Szlachcic, L Handschuh, P Wojciechowski, Ł Marczak, ...
Frontiers in cellular neuroscience 12, 528, 2019
202019
G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads
W Frohmberg, M Kierzynka, J Blazewicz, P Gawron, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences 61 (4), 989--992, 2013
182013
NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome
L Handschuh, P Wojciechowski, M Kazmierczak, ...
Journal of translational medicine 16 (1), 1-16, 2018
172018
Simultaneous detection of mutations and copy number variation of NPM1 in the acute myeloid leukemia using multiplex ligation-dependent probe amplification
M Marcinkowska-Swojak, L Handschuh, P Wojciechowski, M Goralski, ...
Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 786, 14-26, 2016
152016
AthCNV: A map of DNA copy number variations in the Arabidopsis genome
A Zmienko, M Marszalek-Zenczak, P Wojciechowski, A Samelak-Czajka, ...
The Plant Cell 32 (6), 1797-1819, 2020
122020
Graph algorithms for DNA sequencing–origins, current models and the future
J Blazewicz, M Kasprzak, M Kierzynka, W Frohmberg, A Swiercz, ...
European Journal of Operational Research 264 (3), 799-812, 2018
112018
Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark
J Błażewicz, P Formanowicz, P Wojciechowski
International Journal of Applied Mathematics and Computer Science 19 (4 …, 2009
102009
Translational and structural analysis of the shortest legume ENOD40 gene in Lupinus luteus.
J Podkowinski, A Zmienko, B Florek, P Wojciechowski, A Rybarczyk, ...
Acta Biochimica Polonica 56 (1), 2009
92009
DNA sequence assembly involving an acyclic graph model
J Blazewicz, W Frohmberg, P Gawron, M Kasprzak, M Kierzynka, ...
Foundations of Computing and Decision Sciences 38 (1), 25-34, 2013
82013
G-MAPSEQ—a new method for mapping reads to a reference genome
P Wojciechowski, W Frohmberg, M Kierzynka, P Zurkowski, J Blazewicz
Foundations of Computing and Decision Sciences 41 (2), 123-142, 2016
72016
G-PAS 2.0-an improved version of protein alignment tool with an efficient backtracking routine on multiple GPUs
W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences 60 (3), 491-494, 2012
72012
GeVaDSs–decision support system for novel Genetic Vaccine development process
J Blazewicz, M Borowski, W Chaara, P Kedziora, D Klatzmann, ...
BMC bioinformatics 13 (1), 1-16, 2012
62012
GRASShopPER—An algorithm for de novo assembly based on GPU alignments
A Swiercz, W Frohmberg, M Kierzynka, P Wojciechowski, P Zurkowski, ...
PloS one 13 (8), e0202355, 2018
42018
Reference Alignment Based Methods for Quality Evaluation of Multiple Sequence Alignment-A Survey
P Wojciechowski, P Formanowicz, J Blazewicz
Current Bioinformatics 9 (1), 44-56, 2014
22014
Parallel algorithms for evolutionary history reconstruction
J Błażewicz, P Formanowicz, P Kędziora, P Wojciechowski
International Conference on Parallel Processing and Applied Mathematics …, 2003
22003
Genome-scale de novo assembly using ALGA
S Swat, A Laskowski, J Badura, W Frohmberg, P Wojciechowski, ...
Bioinformatics, 2021
2021
G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads
P Gawron, W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences, 2014
2014
G-MSA-a powerful GPU-based tool for multiple sequence alignment
W Frohmberg, M Kierzynka, J Błażewicz, P Wojciechowski
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Articles 1–20