Gordon Lemmon
Gordon Lemmon
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RosettaScripts: a scripting language interface to the Rosetta macromolecular modeling suite
SJ Fleishman, A Leaver-Fay, JE Corn, EM Strauch, SD Khare, N Koga, ...
PloS one 6 (6), e20161, 2011
Practically Useful: What the Rosetta Protein Modeling Suite Can Do for You
KW Kaufmann, GH Lemmon, SL DeLuca, JH Sheehan, J Meiler
Biochemistry 49 (14), 2987-2998, 2010
Genomic landscape of Ewing sarcoma defines an aggressive subtype with co-association of STAG2 and TP53 mutations
Cancer Discovery, 2014
The landscape of somatic mutations in epigenetic regulators across 1,000 paediatric cancer genomes
Nature Communications 5 (3630), 2014
Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus
J Pu, S Wang, Y Yin, G Zhang, RA Carter, J Wang, G Xu, H Sun, M Wang, ...
Proceedings of the National Academy of Sciences 112 (2), 548-553, 2015
Small-molecule ligand docking into comparative models with Rosetta
SA Combs, SL DeLuca, SH DeLuca, GH Lemmon, DP Nannemann, ...
Nature protocols 8 (7), 1277-1298, 2013
Rosetta Ligand docking with flexible XML protocols
G Lemmon, J Meiler
Computational Drug Discovery and Design, 143-155, 2012
Towards ligand docking including explicit interface water molecules
G Lemmon, J Meiler
PloS one 8 (6), e67536, 2013
Genomic landscape of Ewing sarcoma defines an aggressive subtype with co-association of STAG2 and TP53 mutations. Cancer Discov. 2014; 4: 1342–1353. doi: 10.1158/2159-8290
F Tirode, D Surdez, X Ma, M Parker, MC Le Deley, A Bahrami, Z Zhang, ...
CD-14-0622.[Europe PMC free article][Abstract][CrossRef][Google Scholar], 0
Predicting the sensitivity and specificity of published real-time PCR assays
GH Lemmon, SN Gardner
Annals of clinical microbiology and antimicrobials 7 (1), 1-10, 2008
De novo and recessive forms of congenital heart disease have distinct genetic and phenotypic landscapes
WS Watkins, EJ Hernandez, S Wesolowski, BW Bisgrove, RT Sunderland, ...
Nature communications 10 (1), 1-12, 2019
ABCB1 and GST polymorphisms associated with TP53 status in breast cancer
SH Nordgard, MD Ritchie, SD Jensrud, AA Motsinger, GIG Alnęs, ...
Pharmacogenetics and genomics 17 (2), 127-136, 2007
Antigenic evolution of H9N2 chicken influenza viruses isolated in China during 2009–2013 and selection of a candidate vaccine strain with broad cross-reactivity
Y Wei, G Xu, G Zhang, C Wen, F Anwar, S Wang, G Lemmon, J Wang, ...
Veterinary microbiology 182, 1-7, 2016
Computational design of protein-small molecule interfaces
B Allison, S Combs, S DeLuca, G Lemmon, L Mizoue, J Meiler
Journal of structural biology 185 (2), 193-202, 2014
Polyurethane foam response to fire in practical geometries
ML Hobbs, GH Lemmon
Polymer degradation and stability 84 (2), 183-197, 2004
Incidence of germline mutations in cancer-predisposition genes in children with hematologic malignancies: a report from the pediatric cancer genome project
M Walsh, G Wu, M Edmonson, TA Gruber, J Easton, D Yergeau, ...
Blood 124 (21), 127, 2014
Prediction of HIV‐1 protease/inhibitor affinity using RosettaLigand
G Lemmon, K Kaufmann, J Meiler
Chemical Biology & Drug Design 79 (6), 888-896, 2012
SPUF-a simple polyurethane foam mass loss and response model.
ML Hobbs, GH Lemmon
Sandia National Laboratories (SNL), Albuquerque, NM, and Livermore, CA …, 2003
Simultaneous prediction of binding free energy and specificity for PDZ domain–peptide interactions
JJ Crivelli, G Lemmon, KW Kaufmann, J Meiler
Journal of computer-aided molecular design 27 (12), 1051-1065, 2013
An explainable artificial intelligence approach for predicting cardiovascular outcomes using electronic health records
S Wesołowski, G Lemmon, EJ Hernandez, A Henrie, TA Miller, ...
PLOS digital health 1 (1), e0000004, 2022
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