Jan Brezovsky

Cited by

	All	Since 2019
Citations	6818	4526
h-index	39	32
i10-index	57	52

900

450

225

675

20102011201220132014201520162017201820192020202120222023202425 50 47 104 207 294 400 523 574 588 658 810 882 756 828

Public access

View all

21 articles

0 articles

available

not available

Based on funding mandates

Co-authors

Jiri DamborskyMasaryk UniversityVerified email at chemi.muni.cz
Zbynek ProkopMasaryk UniversityVerified email at chemi.muni.cz
Artur GóraBiotechnology Centre Silesian University of TechnologyVerified email at artgora.com
Jaroslav BendlIcahn School of Medicine at Mount Sinai, New YorkVerified email at mssm.edu
Barbora Kozlikovaassoc. prof., Masaryk UniversityVerified email at fi.muni.cz
Sérgio M. MarquesLoschmidt Laboratories, RECETOX, Masaryk University Brno, Czech RepublicVerified email at mail.muni.cz
Bartłomiej SurpetaInternational Institute of Molecular and Cell Biology in WarsawVerified email at iimcb.gov.pl
Martin HofProfessorVerified email at jh-inst.cas.cz
Pavel DvořákAssociate Professor and PI at Masaryk University, Brno, Czech RepublicVerified email at sci.muni.cz
Jan SykoraCzech Technical UniversityVerified email at fel.cvut.cz
Sequeiros-Borja CarlosMScVerified email at amu.edu.pl
Pavlina RezacovaHead of Structural Biology, Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech RepublicVerified email at uochb.cas.cz
Morteza KhabiriAssistant Professor of Biology, Quinnipiac UniversityVerified email at quinnipiac.edu
Jiří FilipovičProfessor (associate), Institute of Computer Science, Masaryk UniversityVerified email at mail.muni.cz
Mariana AmaroJ. Heyrovsky Institute of Physical ChemistryVerified email at jh-inst.cas.cz
Aravind Selvaram ThirunavukarasuAdam Mickiewicz UniversityVerified email at amu.edu.pl
David BakerUniversity of WashingtonVerified email at uw.edu
Sagar KhareAssistant Professor of Chemistry and Chemical Biology, Rutgers UniversityVerified email at rutgers.edu
Uwe BornscheuerProfessor, Biotechnology and Enzyme Catalysis, Greifswald UniversityVerified email at uni-greifswald.de
Dick B. JanssenUniversity of GroningenVerified email at rug.nl

Jan Brezovsky

Faculty of Biology, Adam Mickiewicz University in Poznan

Verified email at amu.edu.pl - Homepage

structural bioinformatics computer simulations molecular biophysics proteins molecular transport


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures E Chovancova, A Pavelka, P Benes, O Strnad, J Brezovsky, B Kozlikova, ... PLOS Computational Biology 8 (10), e1002708, 2012	1246	2012
PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations J Bendl, J Stourac, O Salanda, A Pavelka, ED Wieben, J Zendulka, ... PLoS Comput Biol 10 (1), e1003440, 2014	810	2014
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories A Jurcik, D Bednar, J Byska, SM Marques, K Furmanova, L Daniel, ... Bioinformatics 34 (20), 3586-3588, 2018	323	2018
Gates of enzymes A Gora, J Brezovsky, J Damborsky Chemical reviews 113 (8), 5871-5923, 2013	284	2013
Computational tools for designing and engineering enzymes J Damborsky, J Brezovsky Current opinion in chemical biology 19, 8-16, 2014	259	2014
Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport J Stourac, O Vavra, P Kokkonen, J Filipovic, G Pinto, J Brezovsky, ... Nucleic acids research 47 (W1), W414-W422, 2019	210	2019
PredictSNP2: a unified platform for accurately evaluating SNP effects by exploiting the different characteristics of variants in distinct genomic regions J Bendl, M Musil, J Štourač, J Zendulka, J Damborský, J Brezovský PLoS computational biology 12 (5), e1004962, 2016	197	2016
Tools and data services registry: a community effort to document bioinformatics resources J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ... Nucleic acids research 44 (D1), D38-D47, 2016	183	2016
FireProt: web server for automated design of thermostable proteins M Musil, J Stourac, J Bendl, J Brezovsky, Z Prokop, J Zendulka, ... Nucleic acids research 45 (W1), W393-W399, 2017	177	2017
FireProt: energy-and evolution-based computational design of thermostable multiple-point mutants D Bednar, K Beerens, E Sebestova, J Bendl, S Khare, R Chaloupkova, ... PLoS computational biology 11 (11), e1004556, 2015	175	2015
Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel T Koudelakova, R Chaloupkova, J Brezovsky, Z Prokop, E Sebestova, ... Angewandte Chemie 125 (7), 2013-2017, 2013	169	2013
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures B Kozlikova, E Sebestova, V Sustr, J Brezovsky, O Strnad, L Daniel, ... Bioinformatics 30 (18), 2684-2685, 2014	168	2014
Computational tools for designing and engineering biocatalysts J Damborsky, J Brezovsky Current opinion in chemical biology 13 (1), 26-34, 2009	162	2009
CAVER: algorithms for analyzing dynamics of tunnels in macromolecules A Pavelka, E Sebestova, B Kozlikova, J Brezovsky, J Sochor, ... IEEE/ACM transactions on computational biology and bioinformatics 13 (3 …, 2015	156	2015
Substrate specificity of haloalkane dehalogenases T Koudelakova, E Chovancova, J Brezovsky, M Monincova, A Fortova, ... Biochemical Journal 435 (2), 345-354, 2011	140	2011
Enantioselectivity of haloalkane dehalogenases and its modulation by surface loop engineering Z Prokop, Y Sato, J Brezovsky*, T Mozga, R Chaloupkova, ... Angewandte Chemie International Edition 49 (35), 6111-6115, 2010	136	2010
Software tools for identification, visualization and analysis of protein tunnels and channels J Brezovsky, E Chovancova, A Gora, A Pavelka, L Biedermannova, ... Biotechnology advances 31 (1), 38-49, 2013	125	2013
Engineering a de novo transport tunnel J Brezovsky, P Babkova, O Degtjarik, A Fortova, A Gora, I Iermak, ... ACS Catalysis 6 (11), 7597-7610, 2016	113	2016
HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering J Bendl, J Stourac, E Sebestova, O Vavra, M Musil, J Brezovsky*, ... Nucleic acids research 44 (W1), W479-W487, 2016	111	2016
Enzyme tunnels and gates as relevant targets in drug design SM Marques, L Daniel, T Buryska, Z Prokop, J Brezovsky, J Damborsky Medicinal Research Reviews 37 (5), 1095-1139, 2017	85	2017

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors