| The PRIDE database and related tools and resources in 2019: improving support for quantification data Y Perez-Riverol, A Csordas, J Bai, M Bernal-Llinares, S Hewapathirana, ... Nucleic acids research 47 (D1), D442-D450, 2019 | 6560 | 2019 |
| 2016 update of the PRIDE database and its related tools JA Vizcaíno, A Csordas, N Del-Toro, JA Dianes, J Griss, I Lavidas, ... Nucleic acids research 44 (D1), D447-D456, 2016 | 3825 | 2016 |
| The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013 JA Vizcaíno, RG Côté, A Csordas, JA Dianes, A Fabregat, JM Foster, ... Nucleic acids research 41 (D1), D1063-D1069, 2012 | 2051 | 2012 |
| The reactome pathway knowledgebase 2022 M Gillespie, B Jassal, R Stephan, M Milacic, K Rothfels, A Senff-Ribeiro, ... Nucleic acids research 50 (D1), D687-D692, 2022 | 1560 | 2022 |
| BioContainers: an open-source and community-driven framework for software standardization F da Veiga Leprevost, BA Grüning, S Alves Aflitos, HL Röst, J Uszkoreit, ... Bioinformatics 33 (16), 2580-2582, 2017 | 572 | 2017 |
| B cells sustain inflammation and predict response to immune checkpoint blockade in human melanoma J Griss, W Bauer, C Wagner, M Simon, M Chen, ... Nature communications 10 (1), 4186, 2019 | 329 | 2019 |
| The reactome pathway knowledgebase 2024 M Milacic, D Beavers, P Conley, C Gong, M Gillespie, J Griss, R Haw, ... Nucleic acids research 52 (D1), D672-D678, 2024 | 313 | 2024 |
| ReactomeGSA-efficient multi-omics comparative pathway analysis J Griss, G Viteri, K Sidiropoulos, V Nguyen, A Fabregat, H Hermjakob Molecular & Cellular Proteomics 19 (12), 2115-2125, 2020 | 242 | 2020 |
| The mzIdentML data standard for mass spectrometry-based proteomics results AR Jones, M Eisenacher, G Mayer, O Kohlbacher, J Siepen, SJ Hubbard, ... Molecular & Cellular Proteomics 11 (7), M111. 014381-1-M111. 014381-10, 2012 | 232 | 2012 |
| Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets J Griss, Y Perez-Riverol, S Lewis, DL Tabb, JA Dianes, N Del-Toro, ... Nature methods 13 (8), 651-656, 2016 | 201 | 2016 |
| PRIDE inspector toolsuite: moving toward a universal visualization tool for proteomics data standard formats and quality assessment of ProteomeXchange datasets Y Perez-Riverol, QW Xu, R Wang, J Uszkoreit, J Griss, A Sanchez, ... Molecular & Cellular Proteomics 15 (1), 305-317, 2016 | 175 | 2016 |
| The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience J Griss, AR Jones, T Sachsenberg, M Walzer, L Gatto, J Hartler, ... Molecular & Cellular Proteomics 13 (10), 2765-2775, 2014 | 155 | 2014 |
| Tumor-infiltrating mast cells are associated with resistance to anti-PD-1 therapy R Somasundaram, T Connelly, R Choi, H Choi, A Samarkina, L Li, ... Nature communications 12 (1), 346, 2021 | 154 | 2021 |
| Tumor-associated B-cells induce tumor heterogeneity and therapy resistance R Somasundaram, G Zhang, M Fukunaga-Kalabis, M Perego, C Krepler, ... Nature communications 8 (1), 607, 2017 | 137 | 2017 |
| PRIDE Inspector: a tool to visualize and validate MS proteomics data R Wang, A Fabregat, D Ríos, D Ovelleiro, JM Foster, RG Côté, J Griss, ... Nature biotechnology 30 (2), 135-137, 2012 | 127 | 2012 |
| Persistence of mature dendritic cells, TH2A, and Tc2 cells characterize clinically resolved atopic dermatitis under IL-4Rα blockade C Bangert, K Rindler, T Krausgruber, N Alkon, FM Thaler, H Kurz, T Ayub, ... Science immunology 6 (55), eabe2749, 2021 | 125 | 2021 |
| The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium RG Côté, J Griss, JA Dianes, R Wang, JC Wright, HWP van den Toorn, ... Molecular & Cellular Proteomics 11 (12), 1682-1689, 2012 | 114 | 2012 |
| Tumor-associated B cells in cutaneous primary melanoma and improved clinical outcome K Garg, M Maurer, J Griss, MC Brüggen, IH Wolf, C Wagner, N Willi, ... Human pathology 54, 157-164, 2016 | 103 | 2016 |
| Spectral library searching in proteomics J Griss Proteomics 16 (5), 729-740, 2016 | 99 | 2016 |
| Single-cell analysis reveals innate lymphoid cell lineage infidelity in atopic dermatitis N Alkon, WM Bauer, T Krausgruber, I Goh, J Griss, V Nguyen, B Reininger, ... Journal of Allergy and Clinical Immunology 149 (2), 624-639, 2022 | 83 | 2022 |
