Flexible docking using Tabu search and an empirical estimate of binding affinity CA Baxter, CW Murray, DE Clark, DR Westhead, MD Eldridge Proteins: Structure, Function, and Bioinformatics 33 (3), 367-382, 1998 | 541 | 1998 |
Improved prediction of protein–protein binding sites using a support vector machines approach JR Bradford, DR Westhead Bioinformatics 21 (8), 1487-1494, 2005 | 476 | 2005 |
A primer on learning in Bayesian networks for computational biology CJ Needham, JR Bradford, AJ Bulpitt, DR Westhead PLoS computational biology 3 (8), e129, 2007 | 364 | 2007 |
A unique dual activity amino acid hydroxylase in Toxoplasma gondii EA Gaskell, JE Smith, JW Pinney, DR Westhead, GA McConkey PloS one 4 (3), e4801, 2009 | 355 | 2009 |
Gene-expression profiling of bortezomib added to standard chemoimmunotherapy for diffuse large B-cell lymphoma (REMoDL-B): an open-label, randomised, phase 3 trial A Davies, TE Cummin, S Barrans, T Maishman, C Mamot, U Novak, ... The Lancet Oncology 20 (5), 649-662, 2019 | 258 | 2019 |
Ligand binding: functional site location, similarity and docking SJ Campbell, ND Gold, RM Jackson, DR Westhead Current opinion in structural biology 13 (3), 389-395, 2003 | 247 | 2003 |
Dynamic gene regulatory networks drive hematopoietic specification and differentiation DK Goode, N Obier, MS Vijayabaskar, M Lie-A-Ling, AJ Lilly, R Hannah, ... Developmental cell 36 (5), 572-587, 2016 | 237 | 2016 |
Molecular high-grade B-cell lymphoma: defining a poor-risk group that requires different approaches to therapy C Sha, S Barrans, F Cucco, MA Bentley, MA Care, T Cummin, H Kennedy, ... Journal of Clinical Oncology 37 (3), 202, 2019 | 232 | 2019 |
Evolutionary algorithms in computer-aided molecular design DE Clark, DR Westhead Journal of Computer-Aided Molecular Design 10, 337-358, 1996 | 223 | 1996 |
Depletion of RUNX1/ETO in t (8; 21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding A Ptasinska, SA Assi, D Mannari, SR James, D Williamson, J Dunne, ... Leukemia 26 (8), 1829-1841, 2012 | 207 | 2012 |
RUNX1 reshapes the epigenetic landscape at the onset of haematopoiesis M Lichtinger, R Ingram, R Hannah, D Müller, D Clarke, SA Assi, ... The EMBO journal 31 (22), 4318-4333, 2012 | 193 | 2012 |
A comparison of heuristic search algorithms for molecular docking DR Westhead, DE Clark, CW Murray Journal of Computer-Aided Molecular Design 11, 209-228, 1997 | 186 | 1997 |
Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis IW Manfield, CH Jen, JW Pinney, I Michalopoulos, JR Bradford, ... Nucleic acids research 34 (suppl_2), W504-W509, 2006 | 183 | 2006 |
A comparative study of machine-learning methods to predict the effects of single nucleotide polymorphisms on protein function VG Krishnan, DR Westhead Bioinformatics 19 (17), 2199-2209, 2003 | 177 | 2003 |
Petri Net representations in systems biology JW Pinney, DR Westhead, GA McConkey Biochemical Society Transactions 31 (6), 1513-1515, 2003 | 173 | 2003 |
PRO_LIGAND: An approach to de novo molecular design. 1. Application to the design of organic molecules DE Clark, D Frenkel, SA Levy, J Li, CW Murray, B Robson, B Waszkowycz, ... Journal of computer-aided molecular design 9, 13-32, 1995 | 169 | 1995 |
Protein structural topology: Automated analysis and diagrammatic representation DR Westhead, TWF Slidel, TPJ Flores, JM Thornton Protein Science 8 (4), 897-904, 1999 | 163 | 1999 |
Chromatin accessibility-based characterization of the gene regulatory network underlying Plasmodium falciparum blood-stage development CG Toenhake, SAK Fraschka, MS Vijayabaskar, DR Westhead, ... Cell host & microbe 23 (4), 557-569. e9, 2018 | 161 | 2018 |
Insights into protein–protein interfaces using a Bayesian network prediction method JR Bradford, CJ Needham, AJ Bulpitt, DR Westhead Journal of molecular biology 362 (2), 365-386, 2006 | 157 | 2006 |
Identification of the REST regulon reveals extensive transposable element-mediated binding site duplication R Johnson, RJ Gamblin, L Ooi, AW Bruce, IJ Donaldson, DR Westhead, ... Nucleic acids research 34 (14), 3862-3877, 2006 | 150 | 2006 |