Follow
Geir Kjetil Sandve
Geir Kjetil Sandve
Professor, bioinformatics, University of Oslo
Verified email at ifi.uio.no
Title
Cited by
Cited by
Year
Ten simple rules for reproducible computational research
GK Sandve, A Nekrutenko, J Taylor, E Hovig
PLoS computational biology 9 (10), e1003285, 2013
6812013
A survey of motif discovery methods in an integrated framework
GK Sandve, F Drabløs
Biology direct 1 (1), 1-16, 2006
2102006
Hopfield networks is all you need
H Ramsauer, B Schäfl, J Lehner, P Seidl, M Widrich, T Adler, L Gruber, ...
arXiv preprint arXiv:2008.02217, 2020
1342020
In the loop: promoter–enhancer interactions and bioinformatics
A Mora, GK Sandve, OS Gabrielsen, R Eskeland
Briefings in bioinformatics 17 (6), 980-995, 2016
1332016
The Genomic HyperBrowser: inferential genomics at the sequence level
GK Sandve, S Gundersen, H Rydbeck, IK Glad, L Holden, M Holden, ...
Genome biology 11 (12), 1-12, 2010
1062010
Improved benchmarks for computational motif discovery
GK Sandve, O Abul, V Walseng, F Drabløs
BMC bioinformatics 8 (1), 1-13, 2007
902007
Disease-driving CD4+ T cell clonotypes persist for decades in celiac disease
LF Risnes, A Christophersen, S Dahal-Koirala, RS Neumann, GK Sandve, ...
The Journal of clinical investigation 128 (6), 2642-2650, 2018
842018
Vitamin D receptor ChIP-seq in primary CD4+ cells: relationship to serum 25-hydroxyvitamin D levels and autoimmune disease
AE Handel, GK Sandve, G Disanto, AJ Berlanga-Taylor, G Gallone, ...
BMC medicine 11 (1), 1-11, 2013
812013
Assessment of composite motif discovery methods
K Klepper, GK Sandve, O Abul, J Johansen, F Drablos
BMC bioinformatics 9 (1), 1-16, 2008
672008
A map of direct TF–DNA interactions in the human genome
M Gheorghe, GK Sandve, A Khan, J Chèneby, B Ballester, A Mathelier
Nucleic acids research 47 (4), e21-e21, 2019
622019
Uracil accumulation and mutagenesis dominated by cytosine deamination in CpG dinucleotides in mice lacking UNG and SMUG1
L Alsøe, A Sarno, S Carracedo, D Domanska, F Dingler, L Lirussi, ...
Scientific reports 7 (1), 1-14, 2017
532017
A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding
R Akbar, PA Robert, M Pavlović, JR Jeliazkov, I Snapkov, A Slabodkin, ...
Cell Reports 34 (11), 108856, 2021
522021
Vitamin D receptor binding, chromatin states and association with multiple sclerosis
G Disanto, GK Sandve, AJ Berlanga-Taylor, G Ragnedda, JM Morahan, ...
Human molecular genetics 21 (16), 3575-3586, 2012
502012
HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization
J Paulsen, GK Sandve, S Gundersen, TG Lien, K Trengereid, E Hovig
Bioinformatics 30 (11), 1620-1622, 2014
452014
The Genomic HyperBrowser: an analysis web server for genome-scale data
GK Sandve, S Gundersen, M Johansen, IK Glad, K Gunathasan, L Holden, ...
Nucleic acids research 41 (W1), W133-W141, 2013
452013
Augmenting adaptive immunity: progress and challenges in the quantitative engineering and analysis of adaptive immune receptor repertoires
AJ Brown, I Snapkov, R Akbar, M Pavlović, E Miho, GK Sandve, V Greiff
Molecular Systems Design & Engineering 4 (4), 701-736, 2019
422019
EBNA2 binds to genomic intervals associated with multiple sclerosis and overlaps with vitamin D receptor occupancy
VAG Ricigliano, AE Handel, GK Sandve, V Annibali, G Ristori, R Mechelli, ...
PLoS One 10 (4), e0119605, 2015
422015
Identifying elemental genomic track types and representing them uniformly
S Gundersen, M Kalaš, O Abul, A Frigessi, E Hovig, GK Sandve
BMC bioinformatics 12 (1), 1-17, 2011
422011
Modern hopfield networks and attention for immune repertoire classification
M Widrich, B Schäfl, M Pavlović, H Ramsauer, L Gruber, M Holzleitner, ...
Advances in Neural Information Processing Systems 33, 18832-18845, 2020
412020
High-throughput single-cell analysis of B cell receptor usage among autoantigen-specific plasma cells in celiac disease
B Roy, RS Neumann, O Snir, R Iversen, GK Sandve, KEA Lundin, ...
The Journal of Immunology 199 (2), 782-791, 2017
412017
The system can't perform the operation now. Try again later.
Articles 1–20