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German Plata
German Plata
Adjunct Associate Research Scientist, Columbia University
Verified email at columbia.edu
Title
Cited by
Cited by
Year
Reconstruction and flux‐balance analysis of the Plasmodium falciparum metabolic network
G Plata, TL Hsiao, KL Olszewski, M Llinás, D Vitkup
Molecular systems biology 6 (1), 408, 2010
1642010
Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response
T Sakurai, G Plata, F Rodríguez-Zapata, M Seki, A Salcedo, A Toyoda, ...
BMC Plant Biology 7, 1-17, 2007
1262007
Long-term phenotypic evolution of bacteria
G Plata, CS Henry, D Vitkup
Nature 517 (7534), 369-372, 2015
792015
Global probabilistic annotation of metabolic networks enables enzyme discovery
G Plata, T Fuhrer, TL Hsiao, U Sauer, D Vitkup
Nature Chemical Biology, 2012
692012
The COMBREX project: design, methodology, and initial results
BP Anton, YC Chang, P Brown, HP Choi, LL Faller, J Guleria, Z Hu, ...
PLoS biology 11 (8), e1001638, 2013
662013
Identification of cassava microRNAs under abiotic stress
C Ballén-Taborda, G Plata, S Ayling, F Rodríguez-Zapata, ...
International journal of genomics 2013, 2013
602013
Genetic robustness and functional evolution of gene duplicates
G Plata, D Vitkup
Nucleic acids research 42 (4), 2405-2414, 2014
472014
The rate of the molecular clock and the cost of gratuitous protein synthesis
G Plata, ME Gottesman, D Vitkup
Genome biology 11, 1-10, 2010
382010
Two novel DNAs that enhance symptoms and overcome CMD2 resistance to cassava mosaic disease
J Ndunguru, L De León, CD Doyle, P Sseruwagi, G Plata, JP Legg, ...
Journal of virology 90 (8), 4160-4173, 2016
372016
Growth promotion and antibiotic induced metabolic shifts in the chicken gut microbiome
G Plata, NT Baxter, D Susanti, A Volland-Munson, D Gangaiah, ...
Communications Biology 5 (1), 293, 2022
342022
Molecular function limits divergent protein evolution on planetary timescales
MM Konate, G Plata, J Park, DR Usmanova, H Wang, D Vitkup
Elife 8, e39705, 2019
262019
Protein stability and avoidance of toxic misfolding do not explain the sequence constraints of highly expressed proteins
G Plata, D Vitkup
Molecular biology and evolution 35 (3), 700-703, 2018
222018
Multi-omics characterization of host-derived Bacillus spp. probiotics for improved growth performance in poultry
D Susanti, A Volland, N Tawari, D Gangaiah, G Plata, T Hawkins, ...
Frontiers in Microbiology 12, 747845, 2021
142021
Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection
AT Maredza, F Allie, G Plata, MEC Rey
Molecular Genetics and Genomics 291, 1467-1485, 2016
132016
SiGMoiD: A super-statistical generative model for binary data
X Zhao, G Plata, PD Dixit
PLoS Computational Biology 17 (8), e1009275, 2021
122021
The relationship between the misfolding avoidance hypothesis and protein evolutionary rates in the light of empirical evidence
DR Usmanova, G Plata, D Vitkup
Genome Biology and Evolution 13 (2), evab006, 2021
102021
In silico, in vitro and in vivo characterization of host-associated Latilactobacillus curvatus strains for potential probiotic applications in farmed Atlantic salmon (Salmo salar)
HS Cathers, SP Mane, NR Tawari, J Balakuntla, G Plata, M Krishnamurthy, ...
Scientific Reports 12 (1), 18417, 2022
32022
Interactions between time on diet, antibiotic treatment, and liver abscess development on the fecal microbiome of beef cattle
G Plata, NT Baxter, TB Hawkins, L Huntimer, A Nagireddy, D Susanti, ...
bioRxiv, 2022.09. 16.508319, 2022
12022
Designing host-associated microbiomes using the consumer/resource model
G Plata, M Krishnamurthy, L Herron, P Dixit
bioRxiv, 2023.04. 28.538625, 2023
2023
SMbiot: A Shared Latent Model for Microbiomes and their Hosts
M Krishnamurthy, L Herron, D Susanti, A Volland-Munson, G Plata, P Dixit
bioRxiv, 2022.10. 28.514090, 2022
2022
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