João Carlos Setubal

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Nalvo F Almeida JrProfessor of Bioinformatics, Federal University of Mato Grosso do Sul, BrazilVerified email at facom.ufms.br
Aline Maria da SilvaUniversidade de São PauloVerified email at iq.usp.br
Sergio Verjovski-AlmeidaProfessor Titular Senior, Instituto de Química, Universidade de São PauloVerified email at iq.usp.br
Luciano Antonio DigiampietriUniversidade de São PauloVerified email at usp.br
Emmanuel Dias-NetoA.C.Camargo Cancer CenterVerified email at cipe.accamargo.org.br
Brett TylerOregon State UniversityVerified email at vt.edu
Andrew Maltez ThomasVerified email at unitn.it
Joaquim Martins JuniorCentro Nacional de Pesquisa em Energia e Materias, LNBRVerified email at lnbr.cnpem.br
José S. L. PatanéBioinformatician - Lab. Especial de Ciclo Celular, Instituto ButantanVerified email at butantan.gov.br
Jesus Aparecido FerroUniversidade Estadual Paulista/UNESP - Faculdade de Ciências Agrárias e Veterinárias da JaboticabalVerified email at fcav.unesp.br
Ricardo Jose GiordanoUniversidade de Sao PauloVerified email at iq.usp.br
J. B. Jones + Jeffrey Jonesuniversity of floridaVerified email at ufl.edu
Boris A. VinatzerProfessor, SPES, Virginia TechVerified email at vt.edu
Nian WangJ. R. (Rip) Graves Eminent Scholar Endowed Chair, IFAS, University of Florida; EiC, PhytopathologyVerified email at ufl.edu
Andrew S WarrenResearch Assistant Professor at University of Virginia, Biocomplexity Institute & InitiativeVerified email at vt.edu
David HaakeProfessor of Medicine in Residence, UCLAVerified email at ucla.edu
Patricia C. Dos SantosWake Forest UniversityVerified email at wfu.edu
Ray DixonProfessor of Molecular Microbiology. John Innes CentreVerified email at jic.ac.uk
Derek W WoodSeattle Pacific UniversityVerified email at spu.edu
Richard J. AndersonProfessor of Computer Science and Engineering, University of WashingtonVerified email at cs.washington.edu

João Carlos Setubal

Professor of Bioinformatics, University of Sao Paulo

Verified email at iq.usp.br - Homepage

Microbiomes Genomics Metagenomics Transcriptomics Bioinformatics


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Comparison of the genomes of two Xanthomonas pathogens with differing host specificities ACR da Silva, JA Ferro, FC Reinach, CS Farah, LR Furlan, RB Quaggio, ... Nature 417 (6887), 459-463, 2002	1366	2002
The genome of woodland strawberry (Fragaria vesca) V Shulaev, DJ Sargent, RN Crowhurst, TC Mockler, O Folkerts, ... Nature genetics 43 (2), 109-116, 2011	1284	2011
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1238	1997
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1238	1997
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1238	1997
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1238	1997
The genome sequence of the plant pathogen Xylella fastidiosa AJG Simpson, FC Reinach, P Arruda, FA Abreu, M Acencio, R Alvarenga, ... Nature 406 (6792), 151-157, 2000	1093	2000
The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58 DW Wood, JC Setubal, R Kaul, DE Monks, JP Kitajima, VK Okura, Y Zhou, ... science 294 (5550), 2317-2323, 2001	977	2001
Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni S Verjovski-Almeida, R DeMarco, EAL Martins, PEM Guimarães, ... Nature genetics 35 (2), 148-157, 2003	609	2003
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019	564	2019
Comparative Genomics of Two Leptospira interrogans Serovars Reveals Novel Insights into Physiology and Pathogenesis A Nascimento, AI Ko, EAL Martins, CB Monteiro-Vitorello, PL Ho, ... Journal of bacteriology 186 (7), 2164-2172, 2004	551	2004
Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology TT Tseng, BM Tyler, JC Setubal BMC microbiology 9 (1), 1-9, 2009	545	2009
Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes PC Dos Santos, Z Fang, SW Mason, JC Setubal, R Dixon BMC genomics 13, 1-12, 2012	456	2012
Comparative Analyses of the Complete Genome Sequences of Pierce's Disease and Citrus Variegated Chlorosis Strains of Xylella fastidiosa MA Van Sluys, MC De Oliveira, CB Monteiro-Vitorello, CY Miyaki, ... Journal of bacteriology 185 (3), 1018-1026, 2003	398	2003
Lecture notes in computer science (including subseries lecture notes in artificial intelligence and lecture notes in bioinformatics) S Carlo, F Bonifacio Lecture Notes in Computer Science 12786, 3-20, 2021	357*	2021
Genome Sequence of Azotobacter vinelandii, an Obligate Aerobe Specialized To Support Diverse Anaerobic Metabolic Processes JC Setubal, P Dos Santos, BS Goldman, H Ertesvåg, G Espin, LM Rubio, ... Journal of bacteriology 191 (14), 4534-4545, 2009	327	2009
Genome features of Leptospira interrogans serovar Copenhageni ALTO Nascimento, S Verjovski-Almeida, MA Van Sluys, ... Brazilian Journal of Medical and Biological Research 37, 459-477, 2004	271	2004
The Candidatus Liberibacter–Host Interface: Insights into Pathogenesis Mechanisms and Disease Control N Wang, EA Pierson, JC Setubal, J Xu, JG Levy, Y Zhang, J Li, LT Rangel, ... Annual review of phytopathology 55, 451-482, 2017	269	2017
Genome Sequences of Three Agrobacterium Biovars Help Elucidate the Evolution of Multichromosome Genomes in Bacteria SC Slater, BS Goldman, B Goodner, JC Setubal, SK Farrand, EW Nester, ... Journal of bacteriology 191 (8), 2501-2511, 2009	267	2009
The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity R Cai, J Lewis, S Yan, H Liu, CR Clarke, F Campanile, NF Almeida, ... PLoS pathogens 7 (8), e1002130, 2011	257	2011

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