Aging progression of human gut microbiota C Xu, H Zhu, P Qiu BMC microbiology 19, 1-10, 2019 | 192 | 2019 |
PPR-Meta: a tool for identifying phages and plasmids from metagenomic fragments using deep learning Z Fang, J Tan, S Wu, M Li, C Xu, Z Xie, H Zhu Gigascience 8 (6), giz066, 2019 | 130 | 2019 |
Characteristic dysbiosis of gut microbiota of Chinese patients with diarrhea-predominant irritable bowel syndrome by an insight into the pan-microbiome Z Wang, CM Xu, YX Liu, XQ Wang, L Zhang, M Li, SW Zhu, ZJ Xie, ... Chinese medical journal 132 (08), 889-904, 2019 | 38 | 2019 |
DeePhage: distinguishing virulent and temperate phage-derived sequences in metavirome data with a deep learning approach S Wu, Z Fang, J Tan, M Li, C Wang, Q Guo, C Xu, X Jiang, H Zhu Gigascience 10 (9), giab056, 2021 | 35 | 2021 |
Relationship between gut microbiota and phosphorus metabolism in hemodialysis patients: a preliminary exploration YY Miao, CM Xu, M Xia, HQ Zhu, YQ Chen Chinese medical journal 131 (23), 2792-2799, 2018 | 19 | 2018 |
Multiomics study of gut bacteria and host metabolism in irritable bowel syndrome and depression patients C Xu, Q Jia, L Zhang, Z Wang, S Zhu, X Wang, Y Liu, M Li, J Zhang, ... Frontiers in Cellular and Infection Microbiology 10, 580980, 2020 | 17 | 2020 |
Urinary detection of early responses to checkpoint blockade and of resistance to it via protease-cleaved antibody-conjugated sensors QD Mac, A Sivakumar, H Phuengkham, C Xu, JR Bowen, FY Su, ... Nature biomedical engineering 6 (3), 310-324, 2022 | 14 | 2022 |
Assessing cellular and transcriptional diversity of ileal mucosa among treatment-naïve and treated Crohn’s disease SC Maddipatla, VL Kolachala, S Venkateswaran, AF Dodd, RS Pelia, ... Inflammatory Bowel Diseases 29 (2), 274-285, 2023 | 12 | 2023 |
LightCUD: a program for diagnosing IBD based on human gut microbiome data C Xu, M Zhou, Z Xie, M Li, X Zhu, H Zhu BioData Mining 14, 1-13, 2021 | 12 | 2021 |
Autoimmune diseases exhibit shared alterations in the gut microbiota T Wang, PR Sternes, XK Guo, H Zhao, C Xu, H Xu Rheumatology 63 (3), 856-865, 2024 | 10 | 2024 |
More positive or more negative? Metagenomic analysis reveals roles of virome in human disease-related gut microbiome M Li, C Wang, Q Guo, C Xu, Z Xie, J Tan, S Wu, P Wang, J Guo, Z Fang, ... Frontiers in Cellular and Infection Microbiology 12, 846063, 2022 | 9 | 2022 |
Comprehensive multi-omics single-cell data integration reveals greater heterogeneity in the human immune system C Xu, J Yang, A Kosters, BR Babcock, P Qiu, EEB Ghosn Iscience 25 (10), 2022 | 8 | 2022 |
Proteomics reveal biomethane production process induced by carbon nanotube LX Jian Liu, Fanghua Liu, Jiafeng Yu, Quan Wang, Zhenkai Li, Kui Liu ... Environ Res ., 2021 | 7 | 2021 |
Comprehensive evaluation of protein-coding sORFs prediction based on a random sequence strategy J Yu, L Guo, X Dou, W Jiang, B Qian, J Liu, J Wang, C Wang, C Xu Frontiers in Bioscience-Landmark 26 (8), 272-278, 2021 | 4 | 2021 |
Correction to: Aging progression of human gut microbiota C Xu, H Zhu, P Qiu BMC Microbiol 21 (1), 129, 2021 | 3 | 2021 |
Activity-based urinary biomarkers of response and resistance to checkpoint blockade immunotherapy QD Mac, C Xu, JR Bowen, A Sivakumar, H Phuengkham, FY Su, ... BioRxiv, 2020.12. 10.420265, 2020 | 3 | 2020 |
Distinguish virulent and temperate phage-derived sequences in metavirome data with a deep learning approach S Wu, Z Fang, J Tan, M Li, C Wang, Q Guo, C Xu, X Jiang, H Zhu bioRxiv, 2020.12. 25.424404, 2020 | 2 | 2020 |
Correlating mechanical and gene expression data on the single cell level to investigate metastatic phenotypes KM Young, C Xu, K Ahkee, R Mezencev, SP Swingle, T Yu, A Paikeday, ... Iscience 26 (4), 2023 | 1 | 2023 |
Comparison of cell type annotation algorithms for revealing immune response of COVID-19 C Xu, H Lu, P Qiu Frontiers in Systems Biology 2, 1026686, 2022 | 1 | 2022 |
AI-aided Data Mining in Gut Microbiome: The Road to Precision Medicine X Jiang, C Xu, Q Guo, H Zhu 2021 14th International Congress on Image and Signal Processing, BioMedical …, 2021 | 1 | 2021 |