| Characterizing human lung tissue microbiota and its relationship to epidemiological and clinical features G Yu, MH Gail, D Consonni, M Carugno, M Humphrys, AC Pesatori, ... Genome biology 17, 1-12, 2016 | 324 | 2016 |
| Cervicovaginal microbiota and local immune response modulate the risk of spontaneous preterm delivery MA Elovitz, P Gajer, V Riis, AG Brown, MS Humphrys, JB Holm, J Ravel Nature communications 10 (1), 1305, 2019 | 314 | 2019 |
| Multistate Outbreak of Salmonella Infections Associated with Peanut Butter and Peanut Butter--Containing Products--United States, 2008-2009. C Medus, S Meyer, K Smith, S Jawahir, B Miller, K Vige, M Forstner, ... MMWR: Morbidity & Mortality Weekly Report 58 (4), 2009 | 259 | 2009 |
| VALENCIA: a nearest centroid classification method for vaginal microbial communities based on composition MT France, B Ma, P Gajer, S Brown, MS Humphrys, JB Holm, LE Waetjen, ... Microbiome 8, 1-15, 2020 | 226 | 2020 |
| Association of HPV infection and clearance with cervicovaginal immunology and the vaginal microbiota B Shannon, TJ Yi, S Perusini, P Gajer, B Ma, MS Humphrys, ... Mucosal immunology 10 (5), 1310-1319, 2017 | 201 | 2017 |
| Enhanced trapping of HIV-1 by human cervicovaginal mucus is associated with Lactobacillus crispatus-dominant microbiota KL Nunn, YY Wang, D Harit, MS Humphrys, B Ma, R Cone, J Ravel, ... MBio 6 (5), 10.1128/mbio. 01084-15, 2015 | 181 | 2015 |
| The effect of cigarette smoking on the oral and nasal microbiota G Yu, S Phillips, MH Gail, JJ Goedert, MS Humphrys, J Ravel, Y Ren, ... Microbiome 5, 1-6, 2017 | 166 | 2017 |
| NsrR targets in the Escherichia coli genome: new insights into DNA sequence requirements for binding and a role for NsrR in the regulation of motility JD Partridge, DM Bodenmiller, MS Humphrys, S Spiro Molecular microbiology 73 (4), 680-694, 2009 | 155 | 2009 |
| Simultaneous transcriptional profiling of bacteria and their host cells MS Humphrys, T Creasy, Y Sun, AC Shetty, MC Chibucos, EF Drabek, ... PloS one 8 (12), e80597, 2013 | 146 | 2013 |
| Characterization of toxigenic Vibrio cholerae from Haiti, 2010–2011 D Talkington, C Bopp, C Tarr, MB Parsons, G Dahourou, M Freeman, ... Emerging infectious diseases 17 (11), 2122, 2011 | 142 | 2011 |
| Molecular characterization of the human stomach microbiota in gastric cancer patients G Yu, J Torres, N Hu, R Medrano-Guzman, R Herrera-Goepfert, ... Frontiers in cellular and infection microbiology 7, 302, 2017 | 133 | 2017 |
| Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern Gulf of Mexico HJ Mills, E Hunter, M Humphrys, L Kerkhof, L McGuinness, M Huettel, ... Applied and environmental microbiology 74 (14), 4440-4453, 2008 | 123 | 2008 |
| The cervicovaginal microbiota-host interaction modulates Chlamydia trachomatis infection VL Edwards, SB Smith, EJ McComb, J Tamarelle, B Ma, MS Humphrys, ... MBio 10 (4), 10.1128/mbio. 01548-19, 2019 | 118 | 2019 |
| A comprehensive non-redundant gene catalog reveals extensive within-community intraspecies diversity in the human vagina B Ma, MT France, J Crabtree, JB Holm, MS Humphrys, RM Brotman, ... Nature communications 11 (1), 940, 2020 | 113 | 2020 |
| Ultrahigh-throughput multiplexing and sequencing of> 500-base-pair amplicon regions on the Illumina HiSeq 2500 platform JB Holm, MS Humphrys, CK Robinson, ML Settles, S Ott, L Fu, H Yang, ... MSystems 4 (1), 10.1128/msystems. 00029-19, 2019 | 101 | 2019 |
| Multidrug-resistant typhoid fever with neurologic findings on the Malawi-Mozambique border E Lutterloh, A Likaka, J Sejvar, R Manda, J Naiene, SS Monroe, T Khaila, ... Clinical infectious diseases 54 (8), 1100-1106, 2012 | 98 | 2012 |
| Distinct effects of the cervicovaginal microbiota and herpes simplex type 2 infection on female genital tract immunology B Shannon, P Gajer, TJ Yi, B Ma, MS Humphrys, J Thomas-Pavanel, ... The Journal of infectious diseases 215 (9), 1366-1375, 2017 | 95 | 2017 |
| Group B Streptococcus and the Vaginal Microbiota GH Rosen, TM Randis, PV Desai, KJ Sapra, B Ma, P Gajer, MS Humphrys, ... The Journal of infectious diseases 216 (6), 744-751, 2017 | 85 | 2017 |
| Impact of standard bacterial vaginosis treatment on the genital microbiota, immune milieu, and ex vivo human immunodeficiency virus susceptibility V Joag, O Obila, P Gajer, MC Scott, S Dizzell, M Humphrys, K Shahabi, ... Clinical Infectious Diseases 68 (10), 1675-1683, 2019 | 67 | 2019 |
| Identification of phytodetritus‐degrading microbial communities in sublittoral Gulf of Mexico sands TM Gihring, M Humphrys, HJ Mills, M Huette, JE Kostka Limnology and oceanography 54 (4), 1073-1083, 2009 | 67 | 2009 |
