|After the bottleneck: Genome-wide diversification of the Mycobacterium tuberculosis complex by mutation, recombination, and natural selection|
A Namouchi, X Didelot, U Sch÷ck, B Gicquel, EPC Rocha
Genome research 22 (4), 721-734, 2012
|Tuberculosis due to resistant Haarlem strain, Tunisia|
H Mardassi, A Namouchi, R Haltiti, M Zarrouk, B Mhenni, A Karboul, ...
Emerging Infectious Diseases 11 (6), 957, 2005
|Phylogeny of Mycobacterium tuberculosis Beijing Strains Constructed from Polymorphisms in Genes Involved in DNA Replication, Recombination and Repair|
O Mestre, T Luo, T Dos Vultos, K Kremer, A Murray, A Namouchi, ...
PloS one 6 (1), e16020, 2011
|Mycobacterium tuberculosis lineage 7 strains are associated with prolonged patient delay in seeking treatment for pulmonary tuberculosis in Amhara Region, Ethiopia|
SA Yimer, G Norheim, A Namouchi, ED Zegeye, W Kinander, T T°njum, ...
Journal of clinical microbiology 53 (4), 1301-1309, 2015
|Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period|
A Namouchi, M Guellil, O Kersten, S Hńnsch, C Ottoni, BV Schmid, ...
Proceedings of the National Academy of Sciences 115 (50), E11790-E11797, 2018
|A very virulent genotype of infectious bursal disease virus predominantly associated with recurrent infectious bursal disease outbreaks in Tunisian vaccinated flocks|
H Mardassi, N Khabouchi, A Ghram, A Namouchi, A Karboul
Avian diseases 48 (4), 829-840, 2004
|Insights into the evolutionary history of tubercle bacilli as disclosed by genetic rearrangements within a PE_PGRS duplicated gene pair|
A Karboul, NCG Van Pittius, A Namouchi, V Vincent, C Sola, N Rastogi, ...
BMC evolutionary biology 6 (1), 1-18, 2006
|Genetic profiling of Mycobacterium tuberculosis in Tunisia: predominance and evidence for the establishment of a few genotypes|
A Namouchi, A Karboul, B Mhenni, N Khabouchi, R Haltiti, RB Hassine, ...
Journal of Medical Microbiology 57 (7), 864-872, 2008
|Identification of DNA Binding Motifs of the Mycobacterium tuberculosis PhoP/PhoR Two-Component Signal Transduction System|
M Cimino, C Thomas, A Namouchi, S Dubrac, B Gicquel, DN Gopaul
Public Library of Science 7 (8), e42876, 2012
|Fluoroquinolone and pyrazinamide resistance in multidrug-resistant tuberculosis.|
C Pierre-Audigier, C Surcouf, V Cadet-Daniel, A Namouchi, S Heng, ...
The international journal of tuberculosis and lung disease: the officialá…, 2012
|Evidence for the critical role of a secondary site rpoB mutation in the compensatory evolution and successful transmission of an MDR tuberculosis outbreak strain|
N Meftahi, A Namouchi, B Mhenni, G Brandis, D Hughes, H Mardassi
Journal of Antimicrobial Chemotherapy 71 (2), 324-332, 2016
|The Mycobacterium tuberculosis transcriptional landscape under genotoxic stress|
A Namouchi, M Gˇmez-Mu˝oz, SA Frye, LV Moen, T Rognes, T T°njum, ...
BMC genomics 17 (1), 1-13, 2016
|Evolution of smooth tubercle Bacilli PE and PE_PGRS genes: evidence for a prominent role of recombination and imprint of positive selection|
A Namouchi, A Karboul, M Fabre, MC Gutierrez, H Mardassi
PLoS One 8 (5), e64718, 2013
|Molecular detection of fluoroquinolone-resistance in multi-drug resistant tuberculosis in Cambodia suggests low association with XDR phenotypes|
C Surcouf, S Heng, C Pierre-Audigier, V Cadet-Daniel, A Namouchi, ...
BMC infectious diseases 11 (1), 1-8, 2011
|Phenotypic and genomic comparison of Mycobacterium aurum and surrogate model species to Mycobacterium tuberculosis: implications for drug discovery|
A Namouchi, M Cimino, S Favre-Rochex, P Charles, B Gicquel
BMC genomics 18 (1), 1-9, 2017
|High throughput phenotypic selection of Mycobacterium tuberculosis mutants with impaired resistance to reactive oxygen species identifies genes important for intracellular growth|
O Mestre, R Hurtado-Ortiz, T Dos Vultos, A Namouchi, M Cimino, ...
PLoS One 8 (1), e53486, 2013
|Genomic blueprint of a relapsing fever pathogen in 15th century Scandinavia|
M Guellil, O Kersten, A Namouchi, EL Bauer, M Derrick, Aě Jensen, ...
Proceedings of the National Academy of Sciences 115 (41), 10422-10427, 2018
|A genomic and historical synthesis of plague in 18th century Eurasia|
M Guellil, O Kersten, A Namouchi, S Luciani, I Marota, CA Arcini, ...
Proceedings of the National Academy of Sciences 117 (45), 28328-28335, 2020
|Sch÷ ck U, Gicquel B, Rocha EPC. 2012. After the bottleneck: genome-wide diversification of the Mycobacterium tuberculosis complex by mutation, recombination, and natural selection|
A Namouchi, X Didelot
Genome Res 22, 721-734, 0
|Deciphering the recent phylogenetic expansion of the originally deeply rooted Mycobacterium tuberculosis lineage 7|
SA Yimer, A Namouchi, ED Zegeye, C Holm-Hansen, G Norheim, ...
BMC evolutionary biology 16 (1), 1-10, 2016