Praveen Cherukuri
Praveen Cherukuri
Bioinformatics Scientist
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CDD: a Conserved Domain Database for protein classification
A Marchler-Bauer, JB Anderson, PF Cherukuri, C DeWeese-Scott, ...
Nucleic acids research 33 (suppl_1), D192-D196, 2005
TTC21B contributes both causal and modifying alleles across the ciliopathy spectrum
EE Davis, Q Zhang, Q Liu, BH Diplas, LM Davey, J Hartley, C Stoetzel, ...
Nature genetics 43 (3), 189-196, 2011
The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine
LG Biesecker, JC Mullikin, FM Facio, C Turner, PF Cherukuri, ...
Genome research 19 (9), 1665-1674, 2009
Compound heterozygosity for loss-of-function lysyl-tRNA synthetase mutations in a patient with peripheral neuropathy
HM McLaughlin, R Sakaguchi, C Liu, T Igarashi, D Pehlivan, K Chu, ...
The American Journal of Human Genetics 87 (4), 560-566, 2010
Whole-Exome Sequencing Identifies Homozygous AFG3L2 Mutations in a Spastic Ataxia-Neuropathy Syndrome Linked to Mitochondrial m-AAA Proteases
TM Pierson, D Adams, F Bonn, P Martinelli, PF Cherukuri, JK Teer, ...
PLoS genetics 7 (10), e1002325, 2011
Massively parallel sequencing of exons on the X chromosome identifies RBM10 as the gene that causes a syndromic form of cleft palate
JJ Johnston, JK Teer, PF Cherukuri, NF Hansen, SK Loftus, K Chong, ...
The American Journal of Human Genetics 86 (5), 743-748, 2010
Co-evolutionary analysis of domains in interacting proteins reveals insights into domain–domain interactions mediating protein–protein interactions
R Jothi, PF Cherukuri, A Tasneem, TM Przytycka
Journal of molecular biology 362 (4), 861-875, 2006
Gray platelet syndrome: natural history of a large patient cohort and locus assignment to chromosome 3p
M Gunay-Aygun, Y Zivony-Elboum, F Gumruk, D Geiger, M Cetin, ...
Blood, The Journal of the American Society of Hematology 116 (23), 4990-5001, 2010
Exon capture analysis of G protein-coupled receptors identifies activating mutations in GRM3 in melanoma
TD Prickett, X Wei, I Cardenas-Navia, JK Teer, JC Lin, V Walia, J Gartner, ...
Nature genetics 43 (11), 1119-1126, 2011
Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation
AM Pilon, SS Ajay, SA Kumar, LA Steiner, PF Cherukuri, S Wincovitch, ...
Blood, The Journal of the American Society of Hematology 118 (17), e139-e148, 2011
Circadian changes in long noncoding RNAs in the pineal gland
SL Coon, PJ Munson, PF Cherukuri, D Sugden, MF Rath, M Møller, ...
Proceedings of the National Academy of Sciences 109 (33), 13319-13324, 2012
Predisposition to Cancer Caused by Genetic and Functional Defects of Mammalian Atad5
DW Bell, N Sikdar, KY Lee, JC Price, R Chatterjee, HD Park, J Fox, ...
PLoS genetics 7 (8), e1002245, 2011
Exome sequencing and SNP analysis detect novel compound heterozygosity in fatty acid hydroxylase-associated neurodegeneration
TM Pierson, DR Simeonov, M Sincan, DA Adams, T Markello, G Golas, ...
European journal of human genetics 20 (4), 476-479, 2012
Predicting protein domain interactions from coevolution of conserved regions
MG Kann, R Jothi, PF Cherukuri, TM Przytycka
Proteins: Structure, Function, and Bioinformatics 67 (4), 811-820, 2007
Incidental medical information in whole-exome sequencing
BD Solomon, DW Hadley, DE Pineda-Alvarez, ...
Pediatrics 129 (6), e1605-e1611, 2012
Gene-based sequencing identifies lipid-influencing variants with ethnicity-specific effects in African Americans
AR Bentley, G Chen, D Shriner, AP Doumatey, J Zhou, H Huang, ...
PLoS genetics 10 (3), e1004190, 2014
Exome sequencing as a diagnostic tool in a case of undiagnosed juvenile-onset GM1-gangliosidosis
TM Pierson, DA Adams, T Markello, G Golas, S Yang, M Sincan, ...
Neurology 79 (2), 123-126, 2012
A W-linked palindrome and gene conversion in New World sparrows and blackbirds
JK Davis, PJ Thomas, NISC Comparative Sequencing Program, ...
Chromosome Research 18, 543-553, 2010
An analysis of exome sequencing for diagnostic testing of the genes associated with muscle disease and spastic paraplegia
C Dias, M Sincan, PF Cherukuri, R Rupps, Y Huang, H Briemberg, ...
Human mutation 33 (4), 614-626, 2012
Sequencing of Candidate Chromosome Instability Genes in Endometrial Cancers Reveals Somatic Mutations in ESCO1, CHTF18, and MRE11A
JC Price, LM Pollock, ML Rudd, SK Fogoros, H Mohamed, CL Hanigan, ...
PloS one 8 (6), e63313, 2013
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