Pablo Porras Millán
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The Gene Ontology Resource: 20 years and still GOing strong.
TGO Consortium
Nucleic Acids Research 47 (D1), D330–D338, 2018
The Gene Ontology resource: enriching a GOld mine
Nucleic acids research 49 (D1), D325-D334, 2021
The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
S Orchard, M Ammari, B Aranda, L Breuza, L Briganti, F Broackes-Carter, ...
Nucleic acids research 42 (D1), D358-D363, 2014
Expansion of the Gene Ontology knowledgebase and resources
Gene Ontology Consortium
Nucleic acids research 45 (D1), D331-D338, 2017
The IntAct molecular interaction database in 2012
S Kerrien, B Aranda, L Breuza, A Bridge, F Broackes-Carter, C Chen, ...
Nucleic acids research 40 (D1), D841-D846, 2012
HIPPIE: Integrating protein interaction networks with experiment based quality scores
MH Schaefer, JF Fontaine, A Vinayagam, P Porras, EE Wanker, ...
PloS one 7 (2), e31826, 2012
Non-coding RNA regulatory networks
S Panni, RC Lovering, P Porras, S Orchard
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1863 (6), 194417, 2020
Analyzing protein–protein interaction networks
GCKW Koh, P Porras, B Aranda, H Hermjakob, SE Orchard
Journal of proteome research 11 (4), 2014-2031, 2012
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases
Nucleic acids research 49 (D1), D212-D220, 2021
The IntAct database: efficient access to fine-grained molecular interaction data
N Del Toro, A Shrivastava, E Ragueneau, B Meldal, C Combe, E Barrera, ...
Nucleic acids research 50 (D1), D648-D653, 2022
Detection of alpha-rod protein repeats using a neural network and application to huntingtin
GA Palidwor, S Shcherbinin, MR Huska, T Rasko, U Stelzl, A Arumughan, ...
PLoS computational biology 5 (3), e1000304, 2009
Two isoforms of Saccharomyces cerevisiae glutaredoxin 2 are expressed in vivo and localize to different subcellular compartments
JR Pedrajas, P Porras, E Martínez-Galisteo, CA Padilla, ...
Biochemical journal 364 (3), 617-623, 2002
Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes
BHM Meldal, H Bye-A-Jee, L Gajdoš, Z Hammerová, A Horáčková, ...
Nucleic Acids Research, 2018
Structural Aspects of the Distinct Biochemical Properties of Glutaredoxin 1 and Glutaredoxin 2 from Saccharomyces cerevisiae
KF Discola, MA de Oliveira, JRR Cussiol, G Monteiro, JA Bárcena, ...
Journal of molecular biology 385 (3), 889-901, 2009
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
One single in-frame AUG codon is responsible for a diversity of subcellular localizations of glutaredoxin 2 in Saccharomyces cerevisiae
P Porras, CA Padilla, M Krayl, W Voos, JA Bárcena
Journal of Biological Chemistry 281 (24), 16551-16562, 2006
Interactome mapping provides a network of neurodegenerative disease proteins and uncovers widespread protein aggregation in affected brains
C Haenig, N Atias, AK Taylor, A Mazza, MH Schaefer, J Russ, ...
Cell reports 32 (7), 2020
Glutaredoxins catalyze the reduction of glutathione by dihydrolipoamide with high efficiency
P Porras, JR Pedrajas, E Martı́nez-Galisteo, CA Padilla, C Johansson, ...
Biochemical and biophysical research communications 295 (5), 1046-1051, 2002
Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study
JM Villaveces, RC Jimenez, P Porras, N del-Toro, M Duesbury, ...
Database 2015, bau131, 2015
Dynamic circadian protein–protein interaction networks predict temporal organization of cellular functions
T Wallach, K Schellenberg, B Maier, RKR Kalathur, P Porras, EE Wanker, ...
PLoS genetics 9 (3), e1003398, 2013
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