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Talima Pearson
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QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
6834*2018
Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock
LB Price, M Stegger, H Hasman, M Aziz, J Larsen, PS Andersen, ...
MBio 3 (1), e00305-11, 2012
7152012
Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis
DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ...
The Lancet infectious diseases 14 (4), 319-326, 2014
6652014
Global genetic population structure of Bacillus anthracis
MN Van Ert, WR Easterday, LY Huynh, RT Okinaka, ME Hugh-Jones, ...
PloS one 2 (5), e461, 2007
4342007
The Epidemic of Extended-Spectrum-β-Lactamase-Producing Escherichia coli ST131 Is Driven by a Single Highly Pathogenic Subclone, H30-Rx
LB Price, JR Johnson, M Aziz, C Clabots, B Johnston, V Tchesnokova, ...
MBio 4 (6), e00377-13, 2013
3922013
Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer
T Pearson, P Giffard, S Beckstrom-Sternberg, R Auerbach, H Hornstra, ...
BMC biology 7 (1), 1-14, 2009
3882009
Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales
P Keim, MN Van Ert, T Pearson, AJ Vogler, LY Huynh, DM Wagner
Infection, Genetics and Evolution 4 (3), 205-213, 2004
3652004
Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak
RS Hendriksen, LB Price, JM Schupp, JD Gillece, RS Kaas, ...
MBio 2 (4), e00157-11, 2011
3202011
Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing
T Pearson, JD Busch, J Ravel, TD Read, SD Rhoton, JM U'ren, ...
Proceedings of the National Academy of Sciences 101 (37), 13536-13541, 2004
2992004
Pre-columbian origins for north american anthrax
LJ Kenefic, T Pearson, RT Okinaka, JM Schupp, DM Wagner, J Ravel, ...
PLoS One 4 (3), e4813, 2009
2702009
Molecular epidemiology of anthrax cases associated with recreational use of animal hides and yarn in the United States
CK Marston, CA Allen, J Beaudry, EP Price, SR Wolken, T Pearson, ...
PLoS One 6 (12), e28274, 2011
2452011
Epidemiological Tracking and Population Assignment of the Non-Clonal Bacterium, Burkholderia pseudomallei
J Dale, EP Price, H Hornstra, JD Busch, M Mayo, D Godoy, ...
PLoS neglected tropical diseases 5 (12), e1381, 2011
2372011
Molecular phylogeny of Burkholderia pseudomallei from a remote region of Papua New Guinea
A Baker, T Pearson, EP Price, J Dale, P Keim, H Hornstra, A Greenhill, ...
PLoS One 6 (3), e18343, 2011
2302011
Continuing evolution of Burkholderia mallei through genome reduction and large-scale rearrangements
L Losada, CM Ronning, D DeShazer, D Woods, N Fedorova, ...
Genome biology and evolution 2, 102-116, 2010
1972010
Phylogeography of Francisella tularensis: Global Expansion of a Highly Fit Clone
AJ Vogler, D Birdsell, LB Price, JR Bowers, SM Beckstrom-Sternberg, ...
Journal of bacteriology 191 (8), 2474-2484, 2009
1912009
Whole-Genome-Based Phylogeny and Divergence of the Genus Brucella
JT Foster, SM Beckstrom-Sternberg, T Pearson, JS Beckstrom-Sternberg, ...
Journal of bacteriology 191 (8), 2864-2870, 2009
1892009
Characterization of ceftazidime resistance mechanisms in clinical isolates of Burkholderia pseudomallei from Australia
DS Sarovich, EP Price, AT Von Schulze, JM Cook, M Mayo, LM Watson, ...
PloS one 7 (2), e30789, 2012
1832012
Within-Host Evolution of Burkholderia pseudomallei in Four Cases of Acute Melioidosis
EP Price, HM Hornstra, D Limmathurotsakul, TL Max, DS Sarovich, ...
PLoS pathogens 6 (1), e1000725, 2010
1622010
Strain-Specific Single-Nucleotide Polymorphism Assays for the Bacillus anthracis Ames Strain
MN Van Ert, WR Easterday, TS Simonson, JM U'Ren, T Pearson, ...
Journal of clinical microbiology 45 (1), 47-53, 2007
1422007
VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia
T Pearson, JM U’Ren, JM Schupp, GJ Allan, PG Foster, MJ Mayo, D Gal, ...
Infection, Genetics and Evolution 7 (4), 416-423, 2007
1382007
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