Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP M Hafner, M Landthaler, L Burger, M Khorshid, J Hausser, P Berninger, ... Cell 141 (1), 129-141, 2010 | 3281 | 2010 |
DNA-binding factors shape the mouse methylome at distal regulatory regions MB Stadler, R Murr, L Burger, R Ivanek, F Lienert, A Schöler, E Nimwegen, ... Nature 480 (7378), 490-495, 2011 | 1498 | 2011 |
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation T Baubec, DF Colombo, C Wirbelauer, J Schmidt, L Burger, AR Krebs, ... Nature 520 (7546), 243-247, 2015 | 714 | 2015 |
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins S Kishore, L Jaskiewicz, L Burger, J Hausser, M Khorshid, M Zavolan Nature methods 8 (7), 559-564, 2011 | 556 | 2011 |
Competition between DNA methylation and transcription factors determines binding of NRF1 S Domcke, AF Bardet, P Adrian Ginno, D Hartl, L Burger, D Schübeler Nature 528 (7583), 575-579, 2015 | 501 | 2015 |
PAR-CliP-a method to identify transcriptome-wide the binding sites of RNA binding proteins M Hafner, M Landthaler, L Burger, M Khorshid, J Hausser, P Berninger, ... JoVE (Journal of Visualized Experiments), e2034, 2010 | 364 | 2010 |
Dynamic DNA methylation orchestrates cardiomyocyte development, maturation and disease R Gilsbach, S Preissl, BA Grüning, T Schnick, L Burger, V Benes, A Würch, ... Nature communications 5 (1), 5288, 2014 | 328 | 2014 |
Analysis of intronic and exonic reads in RNA-seq data characterizes transcriptional and post-transcriptional regulation D Gaidatzis, L Burger, M Florescu, MB Stadler Nature biotechnology 33 (7), 722-729, 2015 | 305 | 2015 |
Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions A Feldmann, R Ivanek, R Murr, D Gaidatzis, L Burger, D Schübeler PLoS genetics 9 (12), e1003994, 2013 | 245 | 2013 |
Disentangling direct from indirect co-evolution of residues in protein alignments L Burger, E Van Nimwegen PLoS computational biology 6 (1), e1000633, 2010 | 238 | 2010 |
Accurate prediction of protein–protein interactions from sequence alignments using a Bayesian method L Burger, E Van Nimwegen Molecular systems biology 4 (1), 165, 2008 | 234 | 2008 |
Identification of active regulatory regions from DNA methylation data L Burger, D Gaidatzis, D Schübeler, MB Stadler Nucleic acids research 41 (16), e155-e155, 2013 | 226 | 2013 |
Genome-wide single-molecule footprinting reveals high RNA polymerase II turnover at paused promoters AR Krebs, D Imanci, L Hoerner, D Gaidatzis, L Burger, D Schübeler Molecular cell 67 (3), 411-422. e4, 2017 | 217 | 2017 |
DNA methylation is required for the control of stem cell differentiation in the small intestine KL Sheaffer, R Kim, R Aoki, EN Elliott, J Schug, L Burger, D Schübeler, ... Genes & development 28 (6), 652-664, 2014 | 217 | 2014 |
Aging-dependent demethylation of regulatory elements correlates with chromatin state and improved β cell function D Avrahami, C Li, J Zhang, J Schug, R Avrahami, S Rao, MB Stadler, ... Cell metabolism 22 (4), 619-632, 2015 | 200 | 2015 |
Mechanisms of OCT4-SOX2 motif readout on nucleosomes AK Michael, RS Grand, L Isbel, S Cavadini, Z Kozicka, G Kempf, ... Science 368 (6498), 1460-1465, 2020 | 197 | 2020 |
Target genes of Topoisomerase IIβ regulate neuronal survival and are defined by their chromatin state VK Tiwari, L Burger, V Nikoletopoulou, R Deogracias, S Thakurela, ... Proceedings of the National Academy of Sciences 109 (16), E934-E943, 2012 | 182 | 2012 |
Short sequences can efficiently recruit histone H3 lysine 27 trimethylation in the absence of enhancer activity and DNA methylation P Jermann, L Hoerner, L Burger, D Schübeler Proceedings of the National Academy of Sciences 111 (33), E3415-E3421, 2014 | 158 | 2014 |
Pioneering activity of the C-terminal domain of EBF1 shapes the chromatin landscape for B cell programming S Boller, S Ramamoorthy, D Akbas, R Nechanitzky, L Burger, R Murr, ... Immunity 44 (3), 527-541, 2016 | 127 | 2016 |
A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity PA Ginno, D Gaidatzis, A Feldmann, L Hoerner, D Imanci, L Burger, ... Nature communications 11 (1), 2680, 2020 | 126 | 2020 |