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Johanna K. S. Tiemann
Title
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Cited by
Year
Bringing Molecular Dynamics Simulation Data into View
PW Hildebrand, AS Rose, JKS Tiemann
Trends in biochemical sciences, 2019
2072019
Structural insights into the process of GPCR-G protein complex formation
X Liu, X Xu, D Hilger, P Aschauer, JKS Tiemann, Y Du, H Liu, K Hirata, ...
Cell 177 (5), 1243-1251. e12, 2019
1582019
GPCRmd uncovers the dynamics of the 3D-GPCRome
I Rodríguez-Espigares, M Torrens-Fontanals, JKS Tiemann, ...
Nature Methods 17 (8), 777-787, 2020
1322020
GPCR-SSFE 2.0—a fragment-based molecular modeling web tool for Class A G-protein coupled receptors
CL Worth, F Kreuchwig, JKS Tiemann, A Kreuchwig, M Ritschel, ...
Nucleic acids research 45 (W1), W408-W415, 2017
422017
MDsrv: viewing and sharing molecular dynamics simulations on the web
JKS Tiemann, R Guixà-González, PW Hildebrand, AS Rose
Nature Methods 14 (12), 1123, 2017
412017
Sharing Data from Molecular Simulations
M Abraham, R Apostolov, J Barnoud, P Bauer, C Blau, AMJJ Bonvin, ...
Journal of chemical information and modeling 59 (10), 4093-4099, 2019
372019
SL2: an interactive webtool for modeling of missing segments in proteins
J Ismer, AS Rose, JKS Tiemann, A Goede, R Preissner, PW Hildebrand
Nucleic acids research 44 (W1), W390-W394, 2016
332016
HomolWat: a web server tool to incorporate ‘homologous’ water molecules into GPCR structures
E Mayol, A García-Recio, JKS Tiemann, PW Hildebrand, ...
Nucleic acids research 48 (W1), W54-W59, 2020
242020
The European Research Network on Signal Transduction (ERNEST): Toward a Multidimensional Holistic Understanding of G Protein-Coupled Receptor Signaling
ME Sommer, J Selent, J Carlsson, C De Graaf, DE Gloriam, GM Keseru, ...
ACS Pharmacology & Translational Science, 2020
232020
Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks
J Koehler Leman, S Lyskov, SM Lewis, J Adolf-Bryfogle, RF Alford, ...
Nature communications 12 (1), 6947, 2021
172021
MDverse: Shedding Light on the Dark Matter of Molecular Dynamics Simulations
JKS Tiemann, M Szczuka, L Bouarroudj, M Oussaren, S Garcia, ...
bioRxiv, 2023
162023
Interpreting the molecular mechanisms of disease variants in human transmembrane proteins
JKS Tiemann, H Zschach, K Lindorff-Larsen, A Stein
Biophysical Journal 122 (11), 2176-2191, 2023
132023
MDsrv: visual sharing and analysis of molecular dynamics simulations
M Kampfrath, R Staritzbichler, GP Hernández, AS Rose, JKS Tiemann, ...
Nucleic Acids Research 50 (W1), W483-W489, 2022
82022
Voronoia4RNA—a database of atomic packing densities of RNA structures and their complexes
J Ismer, AS Rose, JKS Tiemann, A Goede, K Rother, PW Hildebrand
Nucleic acids research 41 (D1), D280-D284, 2012
52012
MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts
M Philipp, CW Moth, N Ristic, JKS Tiemann, F Seufert, A Panfilova, ...
Nucleic Acids Research, gkae301, 2024
42024
A fragment based method for modeling of protein segments into cryo-EM density maps
J Ismer, AS Rose, JKS Tiemann, PW Hildebrand
BMC Bioinformatics 18 (1), 475, 2017
22017
Mechanistic insights into G protein association with a G protein-coupled receptor
H Batebi, G Pérez-Hernández, J Mathiesen, M Shi, JKS Tiemann, ...
12023
FragFit: a web-application for interactive modeling of protein segments into cryo-EM density maps
JKS Tiemann, AS Rose, J Ismer, MD Darvish, T Hilal, CMT Spahn, ...
Nucleic Acids Research, 2018
12018
Interpreting the molecular mechanisms of disease variants in human transmembrane proteins
JKS Tiemann, H Zschach, K Lindorff-Larsen, A Stein
BioRxiv, 2022.07. 12.499731, 2022
2022
Dynamics of the Human Y1-Receptor in the Inactive and APO States Investigated by Solid-State Nuclear Magnetic Resonance Spectroscopy and Molecular Dynamics Simulations
A Vogel, H Batebi, JK Tiemann, M Gauglitz, M Bosse, D Huster, ...
Biophysical Journal 118 (3), 528a, 2020
2020
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Articles 1–20