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Nathan C. VerBerkmoes
Nathan C. VerBerkmoes
Research Assistant Professor, University of Texas, El Paso
Verified email at utep.edu - Homepage
Title
Cited by
Cited by
Year
Community proteomics of a natural microbial biofilm
RJ Ram, NC VerBerkmoes, MP Thelen, GW Tyson, BJ Baker, RC Blake, ...
Science 308 (5730), 1915-1920, 2005
7852005
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
MA Mahowald, FE Rey, H Seedorf, PJ Turnbaugh, RS Fulton, A Wollam, ...
Proceedings of the National Academy of Sciences 106 (14), 5859-5864, 2009
7102009
Shotgun metaproteomics of the human distal gut microbiota
NC Verberkmoes, AL Russell, M Shah, A Godzik, M Rosenquist, ...
The ISME journal 3 (2), 179-189, 2009
5612009
Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla
KC Wrighton, BC Thomas, I Sharon, CS Miller, CJ Castelle, ...
Science 337 (6102), 1661-1665, 2012
5592012
Detecting differential and correlated protein expression in label-free shotgun proteomics
B Zhang, NC VerBerkmoes, MA Langston, E Uberbacher, RL Hettich, ...
Journal of proteome research 5 (11), 2909-2918, 2006
4752006
Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease
AR Erickson, BL Cantarel, R Lamendella, Y Darzi, EF Mongodin, C Pan, ...
PloS one 7 (11), e49138, 2012
4352012
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
J Hultman, MP Waldrop, R Mackelprang, MM David, J McFarland, ...
Nature 521 (7551), 208-212, 2015
4032015
Enigmatic, ultrasmall, uncultivated Archaea
BJ Baker, LR Comolli, GJ Dick, LJ Hauser, D Hyatt, BD Dill, ML Land, ...
Proceedings of the National Academy of Sciences 107 (19), 8806-8811, 2010
3042010
Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics
CJ Gobler, DL Berry, ST Dyhrman, SW Wilhelm, A Salamov, AV Lobanov, ...
Proceedings of the National Academy of Sciences 108 (11), 4352-4357, 2011
2812011
Functional analysis of natural microbial consortia using community proteomics
NC VerBerkmoes, VJ Denef, RL Hettich, JF Banfield
Nature Reviews Microbiology 7 (3), 196-205, 2009
2742009
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria
I Lo, VJ Denef, NC VerBerkmoes, MB Shah, D Goltsman, G DiBartolo, ...
Nature 446 (7135), 537-541, 2007
2542007
Molecular Dynamics of the Shewanella Oneidensis Response to Chromate Stress* S
SD Brown, MR Thompson, NC VerBerkmoes, K Chourey, M Shah, J Zhou, ...
Molecular & Cellular Proteomics 5 (6), 1054-1071, 2006
2142006
Direct cellular lysis/protein extraction protocol for soil metaproteomics
K Chourey, J Jansson, N VerBerkmoes, M Shah, KL Chavarria, LM Tom, ...
Journal of proteome research 9 (12), 6615-6622, 2010
2062010
Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing “Leptospirillum rubarum”(Group II) and “Leptospirillum ferrodiazotrophum”(Group III) bacteria in …
DSA Goltsman, VJ Denef, SW Singer, NC VerBerkmoes, M Lefsrud, ...
Applied and environmental microbiology 75 (13), 4599-4615, 2009
2012009
Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
P Wilmes, AF Andersson, MG Lefsrud, M Wexler, M Shah, B Zhang, ...
The ISME journal 2 (8), 853-864, 2008
1972008
Impact of dietary resistant starch on the human gut microbiome, metaproteome, and metabolome
TV Maier, M Lucio, LH Lee, NC VerBerkmoes, CJ Brislawn, J Bernhardt, ...
MBio 8 (5), e01343-17, 2017
1852017
Twelve previously unknown phage genera are ubiquitous in global oceans
K Holmfeldt, N Solonenko, M Shah, K Corrier, L Riemann, ...
Proceedings of the National Academy of Sciences 110 (31), 12798-12803, 2013
1792013
Discovery of a novel methanogen prevalent in thawing permafrost
R Mondav, BJ Woodcroft, EH Kim, CK McCalley, SB Hodgkins, PM Crill, ...
Nature communications 5 (1), 1-7, 2014
1772014
Proteogenomic basis for ecological divergence of closely related bacteria in natural acidophilic microbial communities
VJ Denef, LH Kalnejais, RS Mueller, P Wilmes, BJ Baker, BC Thomas, ...
Proceedings of the National Academy of Sciences 107 (6), 2383-2390, 2010
1772010
Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use
M Kleiner, C Wentrup, C Lott, H Teeling, S Wetzel, J Young, YJ Chang, ...
Proceedings of the National Academy of Sciences 109 (19), E1173-E1182, 2012
1762012
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