| Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa GJ Li, KD Hyde, RL Zhao, S Hongsanan, FA Abdel-Aziz, ... Fungal diversity 78, 1-237, 2016 | 395 | 2016 |
| Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes KV Solomon, CH Haitjema, JK Henske, SP Gilmore, D Borges-Rivera, ... Science 351 (6278), 1192-1195, 2016 | 298 | 2016 |
| A parts list for fungal cellulosomes revealed by comparative genomics CH Haitjema, SP Gilmore, JK Henske, KV Solomon, R De Groot, A Kuo, ... Nature microbiology 2 (8), 1-8, 2017 | 210 | 2017 |
| Anaerobic gut fungi: advances in isolation, culture, and cellulolytic enzyme discovery for biofuel production CH Haitjema, KV Solomon, JK Henske, MK Theodorou, MA O'Malley Biotechnology and bioengineering 111 (8), 1471-1482, 2014 | 157 | 2014 |
| PCR and omics based techniques to study the diversity, ecology and biology of anaerobic fungi: insights, challenges and opportunities JE Edwards, RJ Forster, TM Callaghan, V Dollhofer, SS Dagar, Y Cheng, ... Frontiers in microbiology 8, 1657, 2017 | 131 | 2017 |
| Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes X Peng, SE Wilken, TS Lankiewicz, SP Gilmore, JL Brown, JK Henske, ... Nature microbiology 6 (4), 499-511, 2021 | 125 | 2021 |
| Top-down enrichment guides in formation of synthetic microbial consortia for biomass degradation SP Gilmore, TS Lankiewicz, SE Wilken, JL Brown, JA Sexton, JK Henske, ... ACS synthetic biology 8 (9), 2174-2185, 2019 | 76 | 2019 |
| Metabolic characterization of anaerobic fungi provides a path forward for bioprocessing of crude lignocellulose JK Henske, SE Wilken, KV Solomon, CR Smallwood, V Shutthanandan, ... Biotechnology and Bioengineering 115 (4), 874-884, 2018 | 65 | 2018 |
| Transcriptomic characterization of Caecomyces churrovis: a novel, non-rhizoid-forming lignocellulolytic anaerobic fungus JK Henske, SP Gilmore, D Knop, FJ Cunningham, JA Sexton, ... Biotechnology for biofuels 10, 1-12, 2017 | 63 | 2017 |
| Driving biomass breakdown through engineered cellulosomes SP Gilmore, JK Henske, MA O'Malley Bioengineered 6 (4), 204-208, 2015 | 57 | 2015 |
| Genomic analysis of methanogenic archaea reveals a shift towards energy conservation SP Gilmore, JK Henske, JA Sexton, KV Solomon, S Seppälä, JI Yoo, ... BMC genomics 18, 1-14, 2017 | 50 | 2017 |
| Biomass‐degrading enzymes are catabolite repressed in anaerobic gut fungi JK Henske, SP Gilmore, CH Haitjema, KV Solomon, MA O'Malley AIChE Journal 64 (12), 4263-4270, 2018 | 38 | 2018 |
| Experimentally validated reconstruction and analysis of a genome-scale metabolic model of an anaerobic Neocallimastigomycota fungus SE Wilken, JM Monk, PA Leggieri, CE Lawson, TS Lankiewicz, S Seppälä, ... Msystems 6 (1), 10.1128/msystems. 00002-21, 2021 | 37 | 2021 |
| Robust and effective methodologies for cryopreservation and DNA extraction from anaerobic gut fungi KV Solomon, JK Henske, MK Theodorou, MA O'Malley Anaerobe 38, 39-46, 2016 | 33 | 2016 |
| Mapping the membrane proteome of anaerobic gut fungi identifies a wealth of carbohydrate binding proteins and transporters S Seppälä, KV Solomon, SP Gilmore, JK Henske, MA O’Malley Microbial cell factories 15, 1-14, 2016 | 26 | 2016 |
| Genomic and proteomic biases inform metabolic engineering strategies for anaerobic fungi S Seppälä, TS Lankiewicz, M Saxena, JK Henske, AA Salamov, ... Metabolic engineering communications 10, e00107, 2020 | 24 | 2020 |
| Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins … JL Brown, CL Swift, SJ Mondo, S Seppala, A Salamov, V Singan, ... Biotechnology for Biofuels 14, 1-16, 2021 | 23 | 2021 |
| Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes. Nat Microbiol 6: 499–511 X Peng, SE Wilken, TS Lankiewicz, SP Gilmore, JL Brown, JK Henske, ... | 19 | 2021 |
| Substrate-based differential expression analysis reveals control of biomass degrading enzymes in Pycnoporus cinnabarinus JK Henske, SD Springer, MA O'Malley, A Butler Biochemical engineering journal 130, 83-89, 2018 | 13 | 2018 |
| Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts KV Solomon, JK Henske, SP Gilmore, A Lipzen, IV Grigoriev, ... Fungal genetics and biology 121, 1-9, 2018 | 11 | 2018 |
