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Lee Zamparo
Lee Zamparo
Research Engineer
Verified email at instadeep.com - Homepage
Title
Cited by
Cited by
Year
GuideScan software for improved single and paired CRISPR guide RNA design
AR Perez, Y Pritykin, JA Vidigal, S Chhangawala, L Zamparo, CS Leslie, ...
Nature biotechnology 35 (4), 347-349, 2017
2292017
An integrated model for detecting significant chromatin interactions from high-resolution Hi-C data
M Carty, L Zamparo, M Sahin, A González, R Pelossof, O Elemento, ...
Nature communications 8 (1), 15454, 2017
752017
Beyond trivial counterfactual explanations with diverse valuable explanations
P Rodriguez, M Caccia, A Lacoste, L Zamparo, I Laradji, L Charlin, ...
Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021
462021
Sequential CRISPR gene editing in human iPSCs charts the clonal evolution of myeloid leukemia and identifies early disease targets
T Wang, AR Pine, AG Kotini, H Yuan, L Zamparo, DT Starczynowski, ...
Cell Stem Cell 28 (6), 1074-1089. e7, 2021
432021
BindSpace decodes transcription factor binding signals by large-scale sequence embedding
H Yuan, M Kshirsagar, L Zamparo, Y Lu, CS Leslie
Nature methods 16 (9), 858-861, 2019
372019
Exploring quantitative yeast phenomics with single-cell analysis of DNA damage foci
EB Styles, KJ Founk, LA Zamparo, TL Sing, D Altintas, C Ribeyre, ...
Cell systems 3 (3), 264-277. e10, 2016
312016
Deep autoencoders for dimensionality reduction of high-content screening data
L Zamparo, Z Zhang
arXiv preprint arXiv:1501.01348, 2015
232015
PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiae
K Jin, J Li, FS Vizeacoumar, Z Li, R Min, L Zamparo, FJ Vizeacoumar, ...
Nucleic acids research 40 (D1), D687-D694, 2012
192012
Memview: a pedagogically-motivated visual debugger
P Gries, V Mnih, J Taylor, G Wilson, L Zamparo
Proceedings Frontiers in Education 35th Annual Conference, S1J-11, 2005
162005
Statistical lower bounds on protein copy number from fluorescence expression images
L Zamparo, TJ Perkins
Bioinformatics 25 (20), 2670-2676, 2009
132009
Method and system for meaningful counterfactual explanations
PR LOPEZ, M Caccia, L Zamparo, I Laradji, A Lacoste, DV BERMUDEZ
US Patent App. 17/449,872, 2022
82022
Exploring quantitative yeast phenomics with single-cell analysis of DNA damage foci. Cell Syst. 3: 264–277. e10
EB Styles, KJ Founk, LA Zamparo, TL Sing, D Altintas, C Ribeyre, ...
52016
Globin vector regulatory elements are active in early hematopoietic progenitor cells
A Cabriolu, A Odak, L Zamparo, H Yuan, CS Leslie, M Sadelain
Molecular Therapy 30 (6), 2199-2209, 2022
32022
Sequential CRISPR gene editing in human iPSCs charts the clonal evolution of leukemia
T Wang, AR Pine, J Wesely, H Yuan, L Zamparo, AG Kotini, C Leslie, ...
bioRxiv, 2020.04. 21.051961, 2020
12020
BindSpace: decoding transcription factor binding signals by large-scale joint embedding
H Yuan, M Kshirsagar, L Zamparo, Y Lu, CS Leslie
bioRxiv, 359539, 2018
2018
A Phenomic assessment of sub-cellular morphology in S. cerevisiae using synthetic genetic array and high-content screening
E Styles, L Zamparo, A Verster, K Founk, K Kraus, D Altintas, D Novarina, ...
YEAST 32 (suppl. 1), S59-S59, 2015
2015
Analyzing phenotypes in high-content screening with machine learning
L Zamparo
University of Toronto (Canada), 2015
2015
Two methods to estimate protein copy number from drosophila embryo image data
L Zamparo
Concordia University, 2009
2009
Quantitative Yeast Phenomics: Systematic Single Cell Analysis of DNA Damage Foci
EB Styles, KJ Founk, LA Zamparo, TL Sing, D Altintas, C Ribeyre, ...
Supplementary Material Beyond Trivial Counterfactual Explanations with Diverse Valuable Explanations
P Rodrıguez, M Caccia, A Lacoste, L Zamparo, I Laradji, L Charlin, ...
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