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Alexander S. Rose
Alexander S. Rose
BIOVIA, Dassault Systèmes, San Diego, CA
Verified email at weirdbyte.de - Homepage
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Cited by
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RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology …
SK Burley, C Bhikadiya, C Bi, S Bittrich, L Chen, GV Crichlow, CH Christie, ...
Nucleic acids research 49 (D1), D437-D451, 2021
11742021
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
SK Burley, HM Berman, C Bhikadiya, C Bi, L Chen, L Di Costanzo, ...
Nucleic acids research 47 (D1), D464-D474, 2019
10632019
The RCSB protein data bank: integrative view of protein, gene and 3D structural information
PW Rose, A Prlić, A Altunkaya, C Bi, AR Bradley, CH Christie, ...
Nucleic acids research, gkw1000, 2016
10522016
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475-476, 2018
8592018
Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures
D Sehnal, S Bittrich, M Deshpande, R Svobodová, K Berka, V Bazgier, ...
Nucleic acids research 49 (W1), W431-W437, 2021
7422021
Protein Data Bank: the single global archive for 3D macromolecular structure data
Nucleic acids research 47 (D1), D520-D528, 2019
6722019
Web-based molecular graphics for large complexes
AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose
Proceedings of the 21st international conference on Web3D technology, 185-186, 2016
6142016
DeepSite: protein-binding site predictor using 3D-convolutional neural networks
J Jiménez, S Doerr, G Martínez-Rosell, AS Rose, G De Fabritiis
Bioinformatics 33 (19), 3036-3042, 2017
5462017
NGL Viewer: a web application for molecular visualization
AS Rose, PW Hildebrand
Nucleic acids research 43 (W1), W576-W579, 2015
4942015
Mol*: Towards a Common Library and Tools for Web Molecular Graphics.
D Sehnal, AS Rose, J Koca, SK Burley, S Velankar
MolVa@ EuroVis, 29-33, 2018
1952018
Crystal structure of a common GPCR-binding interface for G protein and arrestin
M Szczepek, F Beyrière, KP Hofmann, M Elgeti, R Kazmin, A Rose, ...
Nature communications 5 (1), 4801, 2014
1892014
Bringing molecular dynamics simulation data into view
PW Hildebrand, AS Rose, JKS Tiemann
Trends in Biochemical Sciences 44 (11), 902-913, 2019
1712019
RCSB Protein Data Bank: architectural advances towards integrated searching and efficient access to macromolecular structure data from the PDB archive
Y Rose, JM Duarte, R Lowe, J Segura, C Bi, C Bhikadiya, L Chen, ...
Journal of molecular biology 433 (11), 166704, 2021
1412021
NGLview–interactive molecular graphics for Jupyter notebooks
H Nguyen, DA Case, AS Rose
Bioinformatics 34 (7), 1241-1242, 2018
1412018
Position of transmembrane helix 6 determines receptor G protein coupling specificity
AS Rose, M Elgeti, U Zachariae, H Grubmüller, KP Hofmann, ...
Journal of the American Chemical Society 136 (32), 11244-11247, 2014
1172014
A multi-pronged approach targeting SARS-CoV-2 proteins using ultra-large virtual screening
C Gorgulla, KMP Das, KE Leigh, M Cespugli, PD Fischer, ZF Wang, ...
Iscience 24 (2), 2021
632021
Molecular graphics: bridging structural biologists and computer scientists
X Martinez, M Krone, N Alharbi, AS Rose, RS Laramee, S O'Donoghue, ...
Structure 27 (11), 1617-1623, 2019
532019
MMTF—an efficient file format for the transmission, visualization, and analysis of macromolecular structures
AR Bradley, AS Rose, A Pavelka, Y Valasatava, JM Duarte, A Prlić, ...
PLoS computational biology 13 (6), e1005575, 2017
512017
Precision vs flexibility in GPCR signaling
M Elgeti, AS Rose, FJ Bartl, PW Hildebrand, KP Hofmann, M Heck
Journal of the American Chemical Society 135 (33), 12305-12312, 2013
472013
MDsrv: viewing and sharing molecular dynamics simulations on the web
JKS Tiemann, R Guixà-González, PW Hildebrand, AS Rose
Nature methods 14 (12), 1123-1124, 2017
392017
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