Piotr Gawron
Piotr Gawron
Luxembourg Centre for Systems Biomedicine
Verified email at cs.put.poznan.pl
Title
Cited by
Cited by
Year
VizBin-an application for reference-independent visualization and human-augmented binning of metagenomic data
CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ...
Microbiome 3 (1), 1-7, 2015
1622015
The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease
A Noronha, J Modamio, Y Jarosz, E Guerard, N Sompairac, G Preciat, ...
Nucleic acids research 47 (D1), D614-D624, 2019
1352019
ReconMap: an interactive visualization of human metabolism
A Noronha, AD Daníelsdóttir, P Gawron, F Jóhannsson, S Jónsdóttir, ...
Bioinformatics 33 (4), 605-607, 2017
502017
Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms
A Mazein, M Ostaszewski, I Kuperstein, S Watterson, N Le Novère, ...
NPJ systems biology and applications 4 (1), 1-10, 2018
432018
MINERVA—a platform for visualization and curation of molecular interaction networks
P Gawron, M Ostaszewski, V Satagopam, S Gebel, A Mazein, M Kuzma, ...
NPJ systems biology and applications 2 (1), 1-6, 2016
422016
Community-driven roadmap for integrated disease maps
M Ostaszewski, S Gebel, I Kuperstein, A Mazein, A Zinovyev, U Dogrusoz, ...
Briefings in bioinformatics 20 (2), 659-670, 2019
382019
Integration and visualization of translational medicine data for better understanding of human diseases
V Satagopam, W Gu, S Eifes, P Gawron, M Ostaszewski, S Gebel, ...
Big data 4 (2), 97-108, 2016
382016
Whole genome assembly from 454 sequencing output via modified DNA graph concept
J Blazewicz, M Bryja, M Figlerowicz, P Gawron, M Kasprzak, E Kirton, ...
Computational Biology and Chemistry 33 (3), 224-230, 2009
262009
VizBin—an application for reference-independent visualization and humanaugmented binning of metagenomic data. Microbiome 3: 1
CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ...
212015
G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads
W Frohmberg, M Kierzynka, J Blazewicz, P Gawron, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences 61 (4), 989--992, 2013
182013
A hybrid MIP-based large neighborhood search heuristic for solving the machine reassignment problem
W Jaśkowski, M Szubert, P Gawron
Annals of Operations Research 242 (1), 33-62, 2016
172016
Integrative omics analysis of the termite gut system adaptation to Miscanthus diet identifies lignocellulose degradation enzymes
M Calusinska, M Marynowska, M Bertucci, B Untereiner, D Klimek, ...
Communications biology 3 (1), 1-12, 2020
142020
MolArt: a molecular structure annotation and visualization tool
D Hoksza, P Gawron, M Ostaszewski, R Schneider
Bioinformatics 34 (23), 4127-4128, 2018
142018
Compositional and functional characterisation of biomass-degrading microbial communities in guts of plant fibre-and soil-feeding higher termites
M Marynowska, X Goux, D Sillam-Dussès, C Rouland-Lefèvre, R Halder, ...
Microbiome 8 (1), 1-18, 2020
112020
RA-map: building a state-of-the-art interactive knowledge base for rheumatoid arthritis
V Singh, GD Kalliolias, M Ostaszewski, M Veyssiere, E Pilalis, P Gawron, ...
Database 2020, 2020
102020
MINERVA API and plugins: opening molecular network analysis and visualization to the community
D Hoksza, P Gawron, M Ostaszewski, E Smula, R Schneider
Bioinformatics 35 (21), 4496-4498, 2019
92019
DNA sequence assembly involving an acyclic graph model
J Blazewicz, W Frohmberg, P Gawron, M Kasprzak, M Kierzynka, ...
Foundations of Computing and Decision Sciences 38 (1), 25-34, 2013
82013
Closing the gap between formats for storing layout information in systems biology
D Hoksza, P Gawron, M Ostaszewski, J Hasenauer, R Schneider
Briefings in bioinformatics 21 (4), 1249-1260, 2020
72020
COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
bioRxiv, 2020
72020
Predictprotein-predicting protein structure and function for 29 years
M Bernhofer, C Dallago, T Karl, V Satagopam, M Heinzinger, M Littmann, ...
bioRxiv, 2021
62021
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