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Tao Ye
Tao Ye
bioinformatics engineer, Institut de Génétique et de Biologie Moléculaire et Cellulaire
Verified email at igbmc.fr
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Cited by
Cited by
Year
Widespread negative response elements mediate direct repression by agonist-liganded glucocorticoid receptor
M Surjit, KP Ganti, A Mukherji, T Ye, G Hua, D Metzger, M Li, P Chambon
Cell 145 (2), 224-241, 2011
6082011
Homeostasis in intestinal epithelium is orchestrated by the circadian clock and microbiota cues transduced by TLRs
A Mukherji, A Kobiita, T Ye, P Chambon
Cell 153 (4), 812-827, 2013
5542013
seqMINER: an integrated ChIP-seq data interpretation platform
T Ye, AR Krebs, MA Choukrallah, C Keime, F Plewniak, I Davidson, ...
Nucleic acids research 39 (6), e35-e35, 2011
4352011
Essential role of microphthalmia transcription factor for DNA replication, mitosis and genomic stability in melanoma
T Strub, S Giuliano, T Ye, C Bonet, C Keime, D Kobi, S Le Gras, ...
Oncogene 30 (20), 2319-2332, 2011
2972011
Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cells
M Benhamed, U Herbig, T Ye, A Dejean, O Bischof
Nature cell biology 14 (3), 266-275, 2012
2932012
T‐cell factor 4 and β‐catenin chromatin occupancies pattern zonal liver metabolism in mice
A Gougelet, C Torre, P Veber, C Sartor, L Bachelot, PD Denechaud, ...
Hepatology 59 (6), 2344-2357, 2014
1822014
Rfx6 maintains the functional identity of adult pancreatic β cells
J Piccand, P Strasser, DJ Hodson, A Meunier, T Ye, C Keime, MC Birling, ...
Cell reports 9 (6), 2219-2232, 2014
1522014
Retinoic acid receptors recognize the mouse genome through binding elements with diverse spacing and topology
E Moutier, T Ye, MA Choukrallah, S Urban, J Osz, A Chatagnon, ...
Journal of Biological Chemistry 287 (31), 26328-26341, 2012
1512012
Sumoylation at chromatin governs coordinated repression of a transcriptional program essential for cell growth and proliferation
H Neyret-Kahn, M Benhamed, T Ye, S Le Gras, JC Cossec, P Lapaquette, ...
Genome research 23 (10), 1563-1579, 2013
1442013
Unstable TTTTA/TTTCA expansions in MARCH6 are associated with Familial Adult Myoclonic Epilepsy type 3
RT Florian, F Kraft, E Leitão, S Kaya, S Klebe, E Magnin, ...
Nature communications 10 (1), 4919, 2019
1402019
Genetic analysis of the biosynthesis of 2-methoxy-3-isobutylpyrazine, a major grape-derived aroma compound impacting wine quality
S Guillaumie, A Ilg, S Réty, M Brette, C Trossat-Magnin, S Decroocq, ...
Plant Physiology 162 (2), 604-615, 2013
1082013
Transcription factor TEAD4 regulates expression of myogenin and the unfolded protein response genes during C2C12 cell differentiation
A Benhaddou, C Keime, T Ye, A Morlon, I Michel, B Jost, G Mengus, ...
Cell Death & Differentiation 19 (2), 220-231, 2012
982012
Cockayne’s syndrome A and B proteins regulate transcription arrest after genotoxic stress by promoting ATF3 degradation
A Epanchintsev, F Costanzo, MA Rauschendorf, M Caputo, T Ye, ...
Molecular cell 68 (6), 1054-1066. e6, 2017
952017
KAT2A/KAT2B-targeted acetylome reveals a role for PLK4 acetylation in preventing centrosome amplification
M Fournier, M Orpinell, C Grauffel, E Scheer, JM Garnier, T Ye, V Chavant, ...
Nature communications 7 (1), 13227, 2016
932016
Hepatitis C virus-induced upregulation of MicroRNA miR-146a-5p in hepatocytes promotes viral infection and deregulates metabolic pathways associated with liver disease pathogenesis
S Bandiera, S Pernot, H El Saghire, SC Durand, C Thumann, E Crouchet, ...
Journal of virology 90 (14), 6387-6400, 2016
922016
Characteristics and controlling factors of deep buried-hill reservoirs in the BZ19-6 structural belt, Bohai Sea area
M Hou, H Cao, H Li, A Chen, A Wei, Y Chen, Y Wang, X Zhou, T Ye
Natural Gas Industry B 6 (4), 305-316, 2019
782019
Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA
B Herquel, K Ouararhni, I Martianov, S Le Gras, T Ye, C Keime, T Lerouge, ...
Nature structural & molecular biology 20 (3), 339, 2013
752013
Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells
S Ravens, C Yu, T Ye, M Stierle, L Tora
Epigenetics & chromatin 8, 1-16, 2015
742015
Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells
I Martianov, MA Choukrallah, A Krebs, T Ye, S Legras, E Rijkers, ...
BMC genomics 11, 1-16, 2010
712010
Transcriptome-wide analysis of microRNA expression in the malaria mosquito Anopheles gambiae
I Biryukova, T Ye, E Levashina
BMC genomics 15, 1-19, 2014
662014
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Articles 1–20