De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ... Nature protocols 8 (8), 1494-1512, 2013 | 6736 | 2013 |
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ... Nature protocols 8 (8), 1494-1512, 2013 | 6736 | 2013 |
Type I interferons and microbial metabolites of tryptophan modulate astrocyte activity and central nervous system inflammation via the aryl hydrocarbon receptor V Rothhammer, ID Mascanfroni, L Bunse, MC Takenaka, JE Kenison, ... Nature medicine 22 (6), 586-597, 2016 | 944 | 2016 |
FLO1 is a variable green beard gene that drives biofilm-like cooperation in budding yeast S Smukalla, M Caldara, N Pochet, A Beauvais, S Guadagnini, C Yan, ... Cell 135 (4), 726-737, 2008 | 482 | 2008 |
Comparative analysis of RNA sequencing methods for degraded or low-input samples X Adiconis, D Borges-Rivera, R Satija, DS DeLuca, MA Busby, AM Berlin, ... Nature methods 10 (7), 623-629, 2013 | 468 | 2013 |
Targeting mi R‐155 restores abnormal microglia and attenuates disease in SOD 1 mice O Butovsky, MP Jedrychowski, R Cialic, S Krasemann, G Murugaiyan, ... Annals of neurology 77 (1), 75-99, 2015 | 322 | 2015 |
Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods BJ Haas, A Dobin, B Li, N Stransky, N Pochet, A Regev Genome biology 20 (1), 1-16, 2019 | 295 | 2019 |
Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing A Kirby, A Gnirke, DB Jaffe, V Barešová, N Pochet, B Blumenstiel, C Ye, ... Nature genetics 45 (3), 299-303, 2013 | 269 | 2013 |
Distinct physiological states of Plasmodium falciparum in malaria-infected patients JP Daily, D Scanfeld, N Pochet, K Le Roch, D Plouffe, M Kamal, O Sarr, ... Nature 450 (7172), 1091-1095, 2007 | 267 | 2007 |
Systematic benchmarking of microarray data classification: assessing the role of non-linearity and dimensionality reduction N Pochet, F De Smet, JAK Suykens, BLR De Moor Bioinformatics 20 (17), 3185-3195, 2004 | 261 | 2004 |
Association of Brain DNA methylation in SORL1, ABCA7, HLA-DRB5, SLC24A4, and BIN1 with pathological diagnosis of Alzheimer disease L Yu, LB Chibnik, GP Srivastava, N Pochet, J Yang, J Xu, J Kozubek, ... JAMA neurology 72 (1), 15-24, 2015 | 242 | 2015 |
Sequence-based estimation of minisatellite and microsatellite repeat variability M Legendre, N Pochet, T Pak, KJ Verstrepen Genome research 17 (12), 1787-1796, 2007 | 240 | 2007 |
Non-invasive diagnosis of endometriosis based on a combined analysis of six plasma biomarkers A Mihalyi, O Gevaert, CM Kyama, P Simsa, N Pochet, F De Smet, ... Human reproduction 25 (3), 654-664, 2010 | 210 | 2010 |
STAR-Fusion: fast and accurate fusion transcript detection from RNA-Seq BJ Haas, A Dobin, N Stransky, B Li, X Yang, T Tickle, A Bankapur, ... BioRxiv, 120295, 2017 | 189 | 2017 |
Nanowire-mediated delivery enables functional interrogation of primary immune cells: application to the analysis of chronic lymphocytic leukemia AK Shalek, JT Gaublomme, L Wang, N Yosef, N Chevrier, MS Andersen, ... Nano letters 12 (12), 6498-6504, 2012 | 181 | 2012 |
A targeted functional RNA interference screen uncovers glypican 5 as an entry factor for hepatitis B and D viruses ER Verrier, CC Colpitts, C Bach, L Heydmann, A Weiss, M Renaud, ... Hepatology 63 (1), 35-48, 2016 | 166 | 2016 |
Does estrogen receptor negative/progesterone receptor positive breast carcinoma exist? L De Maeyer, E Van Limbergen, K De Nys, P Moerman, N Pochet, ... Journal of clinical oncology: official journal of the American Society of …, 2008 | 120 | 2008 |
Axillary lymph node status of operable breast cancers by combined steroid receptor and HER-2 status: triple positive tumours are more likely lymph node positive B Van Calster, I Vanden Bempt, M Drijkoningen, N Pochet, J Cheng, ... Breast cancer research and treatment 113, 181-187, 2009 | 118 | 2009 |
Axillary lymph node status of operable breast cancers by combined steroid receptor and HER-2 status: triple positive tumours are more likely lymph node positive B Van Calster, I Vanden Bempt, M Drijkoningen, N Pochet, J Cheng, ... Breast cancer research and treatment 113, 181-187, 2009 | 118 | 2009 |
Kernel methods in bioengineering, signal and image processing G Camps-Valls Igi Global, 2006 | 112 | 2006 |