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Naoki Kunishima
Naoki Kunishima
株式会社リガクX線研究所、理研放射光科学研究センター
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Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor
N Kunishima, Y Shimada, Y Tsuji, T Sato, M Yamamoto, T Kumasaka, ...
Nature 407 (6807), 971-977, 2000
15542000
Structural views of the ligand-binding cores of a metabotropic glutamate receptor complexed with an antagonist and both glutamate and Gd3+
D Tsuchiya, N Kunishima, N Kamiya, H Jingami, K Morikawa
Proceedings of the National Academy of Sciences 99 (5), 2660-2665, 2002
4402002
Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1· 9 Å resolution: Structural comparisons with the lignin and cytochrome c peroxidases
N Kunishima, K Fukuyama, H Matsubara, H Hatanaka, Y Shibano, ...
Journal of molecular biology 235 (1), 331-344, 1994
2511994
Atomic structure of the GCSF–receptor complex showing a new cytokine–receptor recognition scheme
M Aritomi, N Kunishima, T Okamoto, R Kuroki, Y Ota, K Morikawa
Nature 401 (6754), 713-717, 1999
1871999
Crystal structure of rat Bcl-xL: Implications for the function of the Bcl-2 protein family
M Aritomi, N Kunishima, N Inohara, Y Ishibashi, S Ohta, K Morikawa
Journal of Biological Chemistry 272 (44), 27886-27892, 1997
1771997
Crystal structure of the Holliday junction migration motor protein RuvB from Thermus thermophilus HB8
K Yamada, N Kunishima, K Mayanagi, T Ohnishi, T Nishino, H Iwasaki, ...
Proceedings of the National Academy of Sciences 98 (4), 1442-1447, 2001
1192001
Thermodynamics of protein denaturation at temperatures over 100 C: CutA1 mutant proteins substituted with hydrophobic and charged residues
Y Matsuura, M Takehira, Y Joti, K Ogasahara, T Tanaka, N Ono, ...
Scientific reports 5 (1), 15545, 2015
932015
Imaging fully hydrated whole cells by coherent x-ray diffraction microscopy
D Nam, J Park, M Gallagher-Jones, S Kim, S Kim, Y Kohmura, H Naitow, ...
Physical review letters 110 (9), 098103, 2013
872013
Crystal Structures of Cyanide-and Triiodide-bound Forms of Arthromyces ramosus Peroxidase at Different pH Values: PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN …
K Fukuyama, N Kunishima, F Amada, T Kubota, H Matsubara
Journal of Biological Chemistry 270 (37), 21884-21892, 1995
821995
Crystallographic and functional studies of very short patch repair endonuclease
SE Tsutakawa, T Muto, T Kawate, H Jingami, N Kunishima, M Ariyoshi, ...
Molecular cell 3 (5), 621-628, 1999
811999
Crystal Structures of Biotin Protein Ligase from Pyrococcus horikoshii OT3 and its Complexes: Structural Basis of Biotin Activation
B Bagautdinov, C Kuroishi, M Sugahara, N Kunishima
Journal of molecular biology 353 (2), 322-333, 2005
722005
A novel induced-fit reaction mechanism of asymmetric hot dog thioesterase PAAI
N Kunishima, Y Asada, M Sugahara, J Ishijima, Y Nodake, M Sugahara, ...
Journal of molecular biology 352 (1), 212-228, 2005
712005
Membrane protein structure determination by SAD, SIR, or SIRAS phasing in serial femtosecond crystallography using an iododetergent
T Nakane, S Hanashima, M Suzuki, H Saiki, T Hayashi, K Kakinouchi, ...
Proceedings of the National Academy of Sciences 113 (46), 13039-13044, 2016
672016
Nucleant-mediated protein crystallization with the application of microporous synthetic zeolites
M Sugahara, Y Asada, Y Morikawa, Y Kageyama, N Kunishima
Acta Crystallographica Section D: Biological Crystallography 64 (6), 686-695, 2008
622008
Cloning, Sequencing, and Heterologous Expression of a Gene Coding for Arthromyces ramosus Peroxidase
H Sawai-Hatanaka, T Ashikari, Y Tanaka, Y Asada, T Nakayama, ...
Bioscience, biotechnology, and biochemistry 59 (7), 1221-1228, 1995
601995
Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
B Bagautdinov, Y Matsuura, S Bagautdinova, N Kunishima
Journal of biological chemistry 283 (21), 14739-14750, 2008
582008
Anomalous signal from S atoms in protein crystallographic data from an X-ray free-electron laser
TRM Barends, L Foucar, RL Shoeman, S Bari, SW Epp, R Hartmann, ...
Acta Crystallographica Section D: Biological Crystallography 69 (5), 838-842, 2013
562013
The novel acidophilic structure of the killer toxin from halotolerant yeast demonstrates remarkable folding similarity with a fungal killer toxin
T Kashiwagi, N Kunishima, C Suzuki, F Tsuchiya, S Nikkuni, Y Arata, ...
Structure 5 (1), 81-94, 1997
561997
Pentacoordination of the heme iron of Arthromyces ramosus peroxidase shown by a 1.8 Å resolution crystallographic study at pH 4.5
N Kunishima, F Amada, K Fukuyama, M Kawamoto, T Matsunaga, ...
FEBS letters 378 (3), 291-294, 1996
551996
Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8
NK Lokanath, N Ohshima, K Takio, I Shiromizu, C Kuroishi, N Okazaki, ...
Journal of molecular biology 352 (4), 905-917, 2005
512005
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