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Rama Shankar
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Divergent DNA methylation patterns associated with gene expression in rice cultivars with contrasting drought and salinity stress response
R Garg, VVS Narayana Chevala, R Shankar, M Jain
Scientific reports 5 (1), 14922, 2015
2432015
Transcriptome analyses reveal genotype-and developmental stage-specific molecular responses to drought and salinity stresses in chickpea
R Garg, R Shankar, B Thakkar, H Kudapa, L Krishnamurthy, N Mantri, ...
Scientific reports 6 (1), 19228, 2016
2282016
Transcriptome analysis in different rice cultivars provides novel insights into desiccation and salinity stress responses
R Shankar, A Bhattacharjee, M Jain
Scientific reports 6 (1), 23719, 2016
2092016
Deep Transcriptome Sequencing of Wild Halophyte Rice, Porteresia coarctata, Provides Novel Insights into the Salinity and Submergence Tolerance Factors
R Garg, M Verma, S Agrawal, R Shankar, M Majee, M Jain
DNA research 21 (1), 69-84, 2014
1652014
Genomewide discovery of DNA polymorphisms in rice cultivars with contrasting drought and salinity stress response and their functional relevance
M Jain, KC Moharana, R Shankar, R Kumari, R Garg
Plant Biotechnology Journal 12 (2), 253-264, 2014
1362014
MYC dysregulates mitosis, revealing cancer vulnerabilities
J Rohrberg, D Van de Mark, M Amouzgar, JV Lee, M Taileb, A Corella, ...
Cell reports 30 (10), 3368-3382. e7, 2020
602020
Bisulphite sequencing reveals dynamic DNA methylation under desiccation and salinity stresses in rice cultivars
MS Rajkumar, R Shankar, R Garg, M Jain
Genomics 112 (5), 3537-3548, 2020
562020
De Novo Transcriptome Analysis of Medicinally Important Plantago ovata Using RNA-Seq
S Kotwal, S Kaul, P Sharma, M Gupta, R Shankar, M Jain, MK Dhar
PloS one 11 (3), e0150273, 2016
412016
High-density blood transcriptomics reveals precision immune signatures of SARS-CoV-2 infection in hospitalized individuals
JW Prokop, NL Hartog, D Chesla, W Faber, CP Love, R Karam, ...
Frontiers in immunology 12, 694243, 2021
362021
HSP90 controls SIR2 mediated gene silencing
S Laskar, MK Bhattacharyya, R Shankar, S Bhattacharyya
Plos one 6 (8), e23406, 2011
322011
Genome-wide discovery of DNA polymorphisms by whole genome sequencing differentiates weedy and cultivated rice
C Chai, R Shankar, M Jain, PK Subudhi
Scientific reports 8 (1), 14218, 2018
282018
Whole genome sequence analysis of rice genotypes with contrasting response to salinity stress
PK Subudhi, R Shankar, M Jain
Scientific Reports 10 (1), 21259, 2020
242020
Virus-induced genetics revealed by multidimensional precision medicine transcriptional workflow applicable to COVID-19
JW Prokop, R Shankar, R Gupta, ML Leimanis, D Nedveck, K Uhl, B Chen, ...
Physiological genomics 52 (6), 255-268, 2020
212020
Reversal of infected host gene expression identifies repurposed drug candidates for COVID-19
J Xing, R Shankar, A Drelich, S Paithankar, E Chekalin, T Dexheimer, ...
bioRxiv 2020, 2020
202020
Gene expression signatures identify paediatric patients with multiple organ dysfunction who require advanced life support in the intensive care unit
R Shankar, ML Leimanis, PA Newbury, K Liu, J Xing, D Nedveck, EJ Kort, ...
EBioMedicine 62, 2020
182020
The relationship between leptin, the leptin receptor and FGFR1 in primary human breast tumors
W Boothby-Shoemaker, V Benham, S Paithankar, R Shankar, B Chen, ...
Cells 9 (10), 2224, 2020
152020
Analysis of infected host gene expression reveals repurposed drug candidates and time-dependent host response dynamics for COVID-19
J Xing, R Shankar, A Drelich, S Paithankar, E Chekalin, T Dexheimer, ...
BioRxiv, 2020
142020
CCR5 and biological complexity: The need for data integration and educational materials to address genetic/biological reductionism at the interface of ethical, legal, and …
J Bauss, M Morris, R Shankar, R Olivero, LN Buck, CL Stenger, D Hinds, ...
Frontiers in Immunology 12, 790041, 2021
82021
Sex differences in viral entry protein expression and host transcript responses to SARS-CoV-2
M Sun, R Shankar, M Ko, CD Chang, S Yeh, S Li, K Liu, G Zhou, J Xing, ...
72020
Role of DNA methylation dynamics in desiccation and salinity stress responses in rice cultivars
MS Rajkumar, R Shankar, R Garg, M Jain
BioRxiv, 558064, 2019
72019
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