Jan Christian Bryne
Jan Christian Bryne
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JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update
JC Bryne, E Valen, MHE Tang, T Marstrand, O Winther, I da Piedade, ...
Nucleic acids research 36 (suppl_1), D102-D106, 2007
ELM: the status of the 2010 eukaryotic linear motif resource
CM Gould, F Diella, A Via, P Puntervoll, C Gemünd, ...
Nucleic acids research 38 (suppl_1), D167-D180, 2010
The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation
E Soler, C Andrieu-Soler, E De Boer, JC Bryne, S Thongjuea, ...
Genes & development 24 (3), 277-289, 2010
Sox2 cooperates with Chd7 to regulate genes that are mutated in human syndromes
E Engelen, U Akinci, JC Bryne, J Hou, C Gontan, M Moen, D Szumska, ...
Nature genetics 43 (6), 607-611, 2011
Dynamic long‐range chromatin interactions control Myb proto‐oncogene transcription during erythroid development
R Stadhouders, S Thongjuea, C Andrieu‐Soler, RJ Palstra, JC Bryne, ...
The EMBO journal 31 (4), 986-999, 2012
Transcriptional features of genomic regulatory blocks
A Akalin, D Fredman, E Arner, X Dong, JC Bryne, H Suzuki, CO Daub, ...
Genome biology 10, 1-13, 2009
The regulatory landscape of osteogenic differentiation
AM Håkelien, JC Bryne, KG Harstad, S Lorenz, J Paulsen, J Sun, ...
Stem Cells 32 (10), 2780-2793, 2014
The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner
F Sleutels, W Soochit, M Bartkuhn, H Heath, S Dienstbach, P Bergmaier, ...
Epigenetics & chromatin 5, 1-21, 2012
Unscrambling the genomic chaos of osteosarcoma reveals extensive transcript fusion, recurrent rearrangements and frequent novel TP53 aberrations
S Lorenz, T Barøy, J Sun, T Nome, D Vodák, JC Bryne, AM Håkelien, ...
Oncotarget 7 (5), 5273, 2016
Genome-wide map of quantified epigenetic changes during in vitrochondrogenic differentiation of primary human mesenchymal stem cells
SR Herlofsen, JC Bryne, T Høiby, L Wang, R Issner, X Zhang, MJ Coyne, ...
Bmc Genomics 14, 1-18, 2013
Genome-wide, whole mount in situ analysis of transcriptional regulators in zebrafish embryos
O Armant, M März, R Schmidt, M Ferg, N Diotel, R Ertzer, JC Bryne, ...
Developmental biology 380 (2), 351-362, 2013
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows
T Katayama, K Arakawa, M Nakao, K Ono, KF Aoki-Kinoshita, ...
Journal of biomedical semantics 1, 1-19, 2010
An active registry for bioinformatics web services
S Pettifer, D Thorne, P McDermott, T Attwood, J Baran, JC Bryne, ...
Bioinformatics 25 (16), 2090-2091, 2009
A novel complex, RUNX1-MYEF2, represses hematopoietic genes in erythroid cells
B van Riel, T Pakozdi, R Brouwer, R Monteiro, K Tuladhar, V Franke, ...
Molecular and cellular biology 32 (19), 3814-3822, 2012
BioXSD: the common data-exchange format for everyday bioinformatics web services
M Kalaš, P Puntervoll, A Joseph, E Bartaševičiūtė, A Töpfer, ...
Bioinformatics 26 (18), i540-i546, 2010
A systems approach to analyze transcription factors in mammalian cells
E Soler, C Andrieu-Soler, E de Boer, JC Bryne, S Thongjuea, E Rijkers, ...
Methods 53 (2), 151-162, 2011
The EMBRACE registry.
S Pettifer, D Thorne, P McDermott, T Attwood, J Baran, JC Bryne, ...
EMBnet. news 14 (4), 58-62, 2008
BioXSD: the common data-exchange format for everyday bioinformatics web services
A Töpfer, P Venkataraman, S Pettifer, JC Bryne, J Ison, C Blanchet, ...
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