John E. McCormack

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Brant C. FairclothDepartment of Biological Sciences and Museum of Natural Science, Louisiana State UniversityVerified email at lsu.edu
Robb BrumfieldLouisiana State UniversityVerified email at LSU.edu
Whitney L.E. TsaiMoore Laboratory of Zoology, Occidental College & UCLAVerified email at oxy.edu
Travis C. GlennDept. Environmental Health Science & Institute of Bioinformatics, University of GeorgiaVerified email at uga.edu
Robert W. Bryson Jr.University of WashingtonVerified email at uw.edu
Amanda J ZellmerOccidental CollegeVerified email at oxy.edu
Michael G. HarveyAssistant Professor, The University of Texas at El PasoVerified email at utep.edu
Thomas B. SmithDistinguished Professor of Ecology and Evolutionary Biology, UCLAVerified email at ucla.edu
Eugenia ZarzaEl Colegio de la Frontera Sur - CONACYTVerified email at mail.ecosur.mx
A. Townsend PetersonUniversity Distinguished Professor, Biodiversity Institute; http://orcid.org/0000-0003-0243-2379Verified email at ku.edu
L Lacey KnowlesUniversity of MichiganVerified email at umich.edu
Borja MiláNational Museum of Natural Sciences, CSIC, SpainVerified email at mncn.csic.es
Devon DeRaadPhD candidate, University of KansasVerified email at oxy.edu
ROBERT WAYNEEcology and Evolutionary Biology- UCLAVerified email at g.ucla.edu
Sarah HirdUniversity of ConnecticutVerified email at uconn.edu
Elizabeth DerryberryAssociate Professor, University of TennesseeVerified email at utk.edu
Andrés M. CuervoBird Curator and Professor, Instituto de Ciencias Naturales (ICN), Universidad Nacional de ColombiaVerified email at unal.edu.co
Carlos Daniel CadenaProfessor, Depto. Ciencias Biológicas, Universidad de los AndesVerified email at uniandes.edu.co
Marcio R. PieBiology department, Edge Hill UniversiyVerified email at edgehill.ac.uk
Scott V. EdwardsProfessor of Organismic and Evolutionary Biology, Harvard UniversityVerified email at fas.harvard.edu

John E. McCormack

Biology Professor, Occidental College & Curator of Birds, Moore Laboratory of Zoology

Verified email at oxy.edu - Homepage

Systematics Ornithology Speciation Genomics Phylogenetics


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Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346, 1320-1331, 2014	1969	2014
Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales BC Faircloth, JE McCormack, NG Crawford, MG Harvey, RT Brumfield, ... Systematic Biology 61, 717-726, 2012	1180	2012
Applications of next-generation sequencing to phylogeography and phylogenetics JE McCormack, SM Hird, AJ Zellmer, BC Carstens, RT Brumfield Molecular Phylogenetics and Evolution 66, 526–538, 2013	738	2013
The drivers of tropical speciation BT Smith, JE McCormack, AM Cuervo, MJ Hickerson, A Aleixo, ... Nature 515, 406–409, 2014	612	2014
Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis JE McCormack, BC Faircloth, NG Crawford, PA Gowaty, RT Brumfield, ... Genome Research 22, 746-754, 2012	413	2012
More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs NG Crawford, BC Faircloth, JE McCormack, RT Brumfield, K Winker, ... Biology Letters 8, 783-786, 2012	401	2012
A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing JE McCormack, MG Harvey, BC Faircloth, NG Crawford, TC Glenn, ... PLoS One 8, e54848, 2013	399	2013
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346, 1254449, 2014	374	2014
Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics SV Edwards, Z Xi, A Janke, BC Faircloth, JE McCormack, TC Glenn, ... Molecular Phylogenetics and Evolution 94, 447-462, 2016	366	2016
Does niche divergence accompany allopatric divergence in Aphelocoma jays as predicted under ecological speciation?: insights from tests with niche models JE McCormack, AJ Zellmer, LL Knowles Evolution 64, 1231-1244, 2010	351	2010
Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays JE McCormack, J Heled, KS Delaney, AT Peterson, LL Knowles Evolution 65, 184-202, 2011	280	2011
Sequence capture of ultraconserved elements from bird museum specimens JE McCormack, WLE Tsai, BC Faircloth Molecular Ecology Resources 16, 1189-1203, 2016	247	2016
Recent postglacial range expansion drives the rapid diversification of a songbird lineage in the genus Junco B Milá, JE McCormack, G Castañeda, RK Wayne, TB Smith Proceedings of the Royal Society B: Biological Sciences 274, 2653-2660, 2007	201	2007
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ... Genome Biology 13, 415, 2012	163	2012
Sky islands JE McCormack, H Huang, LL Knowles Encyclopedia of Islands 4, 841-843, 2009	160	2009
High phylogenetic utility of an ultraconserved element probe set designed for Arachnida J Starrett, S Derkarabetian, M Hedin, RW Bryson, JE McCormack, ... Molecular Ecology Resources 17, 812-823, 2017	152	2017
Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design JE McCormack, H Huang, LL Knowles Systematic Biology 58, 501-508, 2010	139	2010
Speciation in the highlands of Mexico: genetic and phenotypic divergence in the Mexican jay (Aphelocoma ultramarina) JE McCormack, AT Peterson, E Bonaccorso, TB Smith Molecular Ecology 17, 2505-2521, 2008	134	2008
Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences JE McCormack, JM Maley, SM Hird, EP Derryberry, GR Graves, ... Molecular Phylogenetics and Evolution 62, 397-406, 2012	113	2012
Landscape genetics of California mule deer (Odocoileus hemionus): the roles of ecological and historical factors in generating differentiation KM Pease, AH Freedman, JP Pollinger, JE McCormack, W Buermann, ... Molecular Ecology 18, 1848-1862, 2009	111	2009

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