John E. McCormack

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Brant C. FairclothDepartment of Biological Sciences and Museum of Natural Science, Louisiana State UniversityVerified email at lsu.edu
Robb BrumfieldLouisiana State UniversityVerified email at LSU.edu
Travis C. GlennDept. Environmental Health Science & Institute of Bioinformatics, University of GeorgiaVerified email at uga.edu
Whitney L.E. TsaiMoore Laboratory of Zoology, Occidental College & UCLAVerified email at oxy.edu
Nicholas CrawfordAuthor & Computational BiologistVerified email at deepforestanalytics.com
Michael G. HarveyAssistant Professor, The University of Texas at El PasoVerified email at utep.edu
Robert W. Bryson Jr.University of WashingtonVerified email at uw.edu
Amanda J ZellmerOccidental CollegeVerified email at oxy.edu
Thomas B. SmithDistinguished Professor of Ecology and Evolutionary Biology, UCLAVerified email at ucla.edu
Eugenia ZarzaEl Colegio de la Frontera Sur - CONACYTVerified email at mail.ecosur.mx
L Lacey KnowlesUniversity of MichiganVerified email at umich.edu
A. Townsend PetersonUniversity Distinguished Professor, Biodiversity Institute; http://orcid.org/0000-0003-0243-2379Verified email at ku.edu
John KlickaCurator of Birds and Professor of Biology, University of WashingtonVerified email at uw.edu
Borja MiláNational Museum of Natural Sciences, CSIC, SpainVerified email at mncn.csic.es
Andrés M. CuervoCurator and Professor, Instituto de Ciencias Naturales (ICN), Universidad Nacional de ColombiaVerified email at unal.edu.co
Carlos Daniel CadenaProfessor, Depto. Ciencias Biológicas, Universidad de los AndesVerified email at uniandes.edu.co
Sarah HirdUniversity of ConnecticutVerified email at uconn.edu
Elizabeth DerryberryAssociate Professor, University of TennesseeVerified email at utk.edu
Marcio R. PieBiology department, Edge Hill UniversiyVerified email at edgehill.ac.uk
Scott V. EdwardsProfessor of Organismic and Evolutionary Biology, Harvard UniversityVerified email at fas.harvard.edu

John E. McCormack

Biology Professor, Occidental College & Curator of Birds & Mammals, Moore Laboratory of Zoology

Verified email at oxy.edu - Homepage

Systematics Ornithology Speciation Genomics Phylogenetics


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Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346, 1320-1331, 2014	1623	2014
Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales BC Faircloth, JE McCormack, NG Crawford, MG Harvey, RT Brumfield, ... Systematic Biology 61, 717-726, 2012	896	2012
Applications of next-generation sequencing to phylogeography and phylogenetics JE McCormack, SM Hird, AJ Zellmer, BC Carstens, RT Brumfield Molecular Phylogenetics and Evolution 66, 526–538, 2013	640	2013
The drivers of tropical speciation BT Smith, JE McCormack, AM Cuervo, MJ Hickerson, A Aleixo, ... Nature 515, 406–409, 2014	475	2014
A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing JE McCormack, MG Harvey, BC Faircloth, NG Crawford, TC Glenn, ... PLoS One 8, e54848, 2013	355	2013
More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs NG Crawford, BC Faircloth, JE McCormack, RT Brumfield, K Winker, ... Biology Letters 8, 783-786, 2012	354	2012
Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis JE McCormack, BC Faircloth, NG Crawford, PA Gowaty, RT Brumfield, ... Genome Research 22, 746-754, 2012	350	2012
Does niche divergence accompany allopatric divergence in Aphelocoma jays as predicted under ecological speciation?: insights from tests with niche models JE McCormack, AJ Zellmer, LL Knowles Evolution 64, 1231-1244, 2010	315	2010
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346, 1254449, 2014	308	2014
Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics SV Edwards, Z Xi, A Janke, BC Faircloth, JE McCormack, TC Glenn, ... Molecular Phylogenetics and Evolution 94, 447-462, 2016	296	2016
Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays JE McCormack, J Heled, KS Delaney, AT Peterson, LL Knowles Evolution 65, 184-202, 2011	265	2011
Recent postglacial range expansion drives the rapid diversification of a songbird lineage in the genus Junco B Milá, JE McCormack, G Castañeda, RK Wayne, TB Smith Proceedings of the Royal Society B: Biological Sciences 274, 2653-2660, 2007	189	2007
Sequence capture of ultraconserved elements from bird museum specimens JE McCormack, WLE Tsai, BC Faircloth Molecular Ecology Resources 16, 1189-1203, 2016	182	2016
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ... Genome Biology 13, 415, 2012	146	2012
Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design JE McCormack, H Huang, LL Knowles Systematic Biology 58, 501-508, 2010	125	2010
Sky Islands JE McCormack, H Huang, LL Knowles Encyclopedia of Islands 4, 841-843, 2009	124	2009
Speciation in the highlands of Mexico: genetic and phenotypic divergence in the Mexican jay (Aphelocoma ultramarina) JE McCormack, AT Peterson, E Bonaccorso, TB Smith Molecular Ecology 17, 2505-2521, 2008	120	2008
Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences JE McCormack, JM Maley, SM Hird, EP Derryberry, GR Graves, ... Molecular Phylogenetics and Evolution 62, 397-406, 2012	104	2012
Landscape genetics of California mule deer (Odocoileus hemionus): the roles of ecological and historical factors in generating differentiation KM Pease, AH Freedman, JP Pollinger, JE McCormack, W Buermann, ... Molecular Ecology 18, 1848-1862, 2009	97	2009
High phylogenetic utility of an ultraconserved element probe set designed for Arachnida J Starrett, S Derkarabetian, M Hedin, RW Bryson, JE McCormack, ... Molecular Ecology Resources 17, 812-823, 2017	95	2017

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