Follow
Helena Rasche
Helena Rasche
Onderzoeker in Opleiding, Department Pathology, Erasmus Medical Center
Verified email at erasmusmc.nl
Title
Cited by
Cited by
Year
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ...
Nucleic acids research 46 (W1), W537-W544, 2018
37202018
Apollo: democratizing genome annotation
NA Dunn, DR Unni, C Diesh, M Munoz-Torres, NL Harris, E Yao, ...
PLoS computational biology 15 (2), e1006790, 2019
2002019
Galaxy and Apollo as a biologist-friendly interface for high-quality cooperative phage genome annotation
J Ramsey, H Rasche, C Maughmer, A Criscione, E Mijalis, M Liu, JC Hu, ...
PLOS Computational Biology 16 (11), e1008214, 2020
1132020
Galactic Circos: User-friendly Circos plots within the Galaxy platform
H Rasche, S Hiltemann
GigaScience 9 (6), giaa065, 2020
402020
Galaxy Training: A powerful framework for teaching!
S Hiltemann, H Rasche, S Gladman, HR Hotz, D Larivière, D Blankenberg, ...
PLoS computational biology 19 (1), e1010752, 2023
362023
User-friendly, scalable tools and workflows for single-cell RNA-seq analysis
P Moreno, N Huang, JR Manning, S Mohammed, A Solovyev, K Polanski, ...
Nature methods 18 (4), 327-328, 2021
312021
Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases
S Spoor, CH Cheng, LA Sanderson, B Condon, A Almsaeed, M Chen, ...
Database 2019, baz077, 2019
232019
Fostering accessible online education using Galaxy as an e-learning platform
B Serrano-Solano, MC Föll, C Gallardo-Alba, A Erxleben, H Rasche, ...
PLoS computational biology 17 (5), e1008923, 2021
172021
Tool recommender system in Galaxy using deep learning
A Kumar, H Rasche, B Grüning, R Backofen
GigaScience 10 (1), giaa152, 2021
162021
de. NBI Cloud federation through ELIXIR AAI
P Belmann, B Fischer, J Krüger, M Procházka, H Rasche, M Prinz, ...
F1000Research 8, 2019
142019
User-friendly, scalable tools and workflows for single-cell analysis
P Moreno, N Huang, JR Manning, S Mohammed, A Solovyev, K Polanski, ...
bioRxiv, 2020.04. 08.032698, 2020
112020
A Sorting Hat For Clusters. Dynamic Provisioning of Compute Nodes for Colocated Large Scale Computational Research Infrastructures
J Bauer, M Messner, M Janczyk, D Suchodoletz, B Wiebelt, H Rasche
Universität Tübingen, 2019
102019
Game of Templates. Deploying and (re-) using Virtualized Research Environments in High-Performance and High-Throughput Computing
J Bauer, D Suchodoletz, J Vollmer, H Rasche
Universität Tübingen, 2019
102019
Training infrastructure as a service
H Rasche, C Hyde, J Davis, S Gladman, N Coraor, A Bretaudeau, ...
GigaScience 12, giad048, 2023
62023
The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond
S Bray, J Chilton, M Bernt, N Soranzo, M van den Beek, B Batut, ...
Genome research 33 (2), 261-268, 2023
42023
GGA: Galaxy for genome annotation, teaching, and genomic databases
H Rasche, B Grüning, N Dunn, A Bretaudeau
F1000Res 7 (10.7490), f1000research, 2018
42018
Planemo: a command-line toolkit for developing, deploying, and executing scientific data analyses
S Bray, M Bernt, N Soranzo, M van den Beek, B Batut, H Rasche, M Čech, ...
bioRxiv, 2022.03. 13.483965, 2022
22022
Expanding the Galaxy’s reference data
N VijayKrishna, J Joshi, N Coraor, J Hillman-Jackson, D Bouvier, ...
Bioinformatics advances 2 (1), vbac030, 2022
22022
Galaxy Genome Annotation project: Integrating Galaxy and GMOD for genome annotation
A Bretaudeau, N Dunn, S Gladman, B Grüning, H Rasche, T Seemann
F1000Research 7 (10.7490), f1000research, 2018
22018
Mapping
J Wolff, B Batut, H Rasche
Galaxy Training Network, 2024
12024
The system can't perform the operation now. Try again later.
Articles 1–20