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Robin Shields-Cutler
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US immigration westernizes the human gut microbiome
P Vangay, AJ Johnson, TL Ward, GA Al-Ghalith, RR Shields-Cutler, ...
Cell 175 (4), 962-972. e10, 2018
6222018
Daily sampling reveals personalized diet-microbiome associations in humans
AJ Johnson, P Vangay, GA Al-Ghalith, BM Hillmann, TL Ward, ...
Cell host & microbe 25 (6), 789-802. e5, 2019
5002019
Evaluating the information content of shallow shotgun metagenomics
B Hillmann, GA Al-Ghalith, RR Shields-Cutler, Q Zhu, DM Gohl, ...
Msystems 3 (6), 10.1128/msystems. 00069-18, 2018
2972018
Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders
GB Saffouri, RR Shields-Cutler, J Chen, Y Yang, HR Lekatz, VL Hale, ...
Nature communications 10 (1), 2012, 2019
2302019
Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity
XS Zhang, J Li, KA Krautkramer, M Badri, T Battaglia, TC Borbet, H Koh, ...
Elife 7, e37816, 2018
932018
Personalized Microbiome Class Students; et al. Daily sampling reveals personalized diet-microbiome associations in humans
AJ Johnson, P Vangay, GA Al-Ghalith, BM Hillmann, TL Ward, ...
Cell Host Microbe 25 (6), 789-802, 2019
782019
SHI7 is a self-learning pipeline for multipurpose short-read DNA quality control
GA Al-Ghalith, B Hillmann, K Ang, R Shields-Cutler, D Knights
Msystems 3 (3), 10.1128/msystems. 00202-17, 2018
612018
Human Urinary Composition Controls Antibacterial Activity of Siderocalin*♦
RR Shields-Cutler, JR Crowley, CS Hung, AE Stapleton, CC Aldrich, ...
Journal of Biological Chemistry 290 (26), 15949-15960, 2015
592015
SplinectomeR enables group comparisons in longitudinal microbiome studies
RR Shields-Cutler, GA Al-Ghalith, M Yassour, D Knights
Frontiers in microbiology 9, 330633, 2018
582018
SHOGUN: a modular, accurate and scalable framework for microbiome quantification
B Hillmann, GA Al-Ghalith, RR Shields-Cutler, Q Zhu, R Knight, D Knights
Bioinformatics 36 (13), 4088-4090, 2020
422020
Dysbiosis patterns during re-induction/salvage versus induction chemotherapy for acute leukemia
A Rashidi, T Kaiser, R Shields-Cutler, C Graiziger, SG Holtan, ...
Scientific reports 9 (1), 6083, 2019
412019
Human metabolome-derived cofactors are required for the antibacterial activity of siderocalin in urine
RR Shields-Cutler, JR Crowley, CD Miller, AE Stapleton, W Cui, ...
Journal of Biological Chemistry 291 (50), 25901-25910, 2016
372016
Personalized Microbiome Class Students, Walter J, Menon R, Koecher K, Knights D. 2019. Daily sampling reveals personalized diet-microbiome associations in humans
AJ Johnson, P Vangay, GA Al-Ghalith, BM Hillmann, TL Ward, ...
Cell Host Microbe 25 (6), 789-802, 0
34
Obesity induces gut microbiota alterations and augments acute graft-versus-host disease after allogeneic stem cell transplantation
LT Khuat, CT Le, CCS Pai, RR Shields-Cutler, SG Holtan, A Rashidi, ...
Science translational medicine 12 (571), eaay7713, 2020
322020
Pretransplant gut colonization with intrinsically vancomycin-resistant enterococci (E. gallinarum and E. casseliflavus) and outcomes of allogeneic hematopoietic cell …
A Rashidi, M Ebadi, RR Shields-Cutler, TE DeFor, GA Al-Ghalith, ...
Biology of Blood and Marrow Transplantation 24 (6), 1260-1263, 2018
212018
Rapid divergence of two classes of Haemophilus ducreyi
EE Ricotta, N Wang, R Cutler, JG Lawrence, TL Humphreys
Journal of bacteriology 193 (12), 2941-2947, 2011
172011
Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders. Nat Commun. 2019; 10 (1): 2012
GB Saffouri, RR Shields-Cutler, J Chen, Y Yang, HR Lekatz, VL Hale, ...
External Resources Crossref (DOI), 2021
152021
Bacterial community structure and function distinguish gut sites in captive red‐shanked doucs (Pygathrix nemaeus)
JB Clayton, RR Shields‐Cutler, SL Hoops, GA Al‐Ghalith, JCM Sha, ...
American journal of primatology 81 (10-11), e22977, 2019
142019
Repeated vaginal exposures to the common cosmetic and household preservative methylisothiazolinone induce persistent, mast cell-dependent genital pain in ND4 mice
E Arriaga-Gomez, J Kline, E Emanuel, N Neamonitaki, T Yangdon, ...
International journal of molecular sciences 20 (21), 5361, 2019
122019
Evaluating the Information Content of Shallow Shotgun Metagenomics. mSystems 2018; 3
B Hillmann, GA Al-Ghalith, RR Shields-Cutler, Q Zhu, DM Gohl, ...
DOI 10, 00069-18, 2018
92018
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