Francesca Chiaromonte
Francesca Chiaromonte
Professor of Statistics, Pennsylvania State University, Sant'Anna School of Advanced Studies
Verified email at
Cited by
Cited by
Initial sequencing and comparative analysis of the mouse genome
European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ...
Nature 420 (6915), 520-562, 2002
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
Project management: Fulton Lucinda A. 1 Mardis Elaine R. 1 Wilson Richard K. 1
Nature 432 (7018), 695-716, 2004
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ...
Nature 428 (6982), 493-521, 2004
Scoring pairwise genomic sequence alignments
F Chiaromonte, VB Yap, W Miller
Biocomputing 2002, 115-126, 2001
Complete Khoisan and Bantu genomes from southern Africa
SC Schuster, W Miller, A Ratan, LP Tomsho, B Giardine, LR Kasson, ...
Nature 463 (7283), 943-947, 2010
Contour regression: a general approach to dimension reduction
B Li, H Zha, F Chiaromonte
The Annals of Statistics 33 (4), 1580-1616, 2005
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution
RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, ...
Genome research 13 (1), 13-26, 2003
Computational pan-genomics: status, promises and challenges
Briefings in bioinformatics 19 (1), 118-135, 2018
Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis
RA Gutiérrez, LV Lejay, A Dean, F Chiaromonte, DE Shasha, GM Coruzzi
Genome biology 8, 1-13, 2007
Evidence for sharp increase in the economic damages of extreme natural disasters
M Coronese, F Lamperti, K Keller, F Chiaromonte, A Roventini
Proceedings of the National Academy of Sciences 116 (43), 21450-21455, 2019
The genome-wide determinants of human and chimpanzee microsatellite evolution
YD Kelkar, S Tyekucheva, F Chiaromonte, KD Makova
Genome research 18 (1), 30-38, 2008
Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression
Y Cheng, W Wu, SA Kumar, D Yu, W Deng, T Tripic, DC King, KB Chen, ...
Genome research 19 (12), 2172-2184, 2009
Maternal age effect and severe germ-line bottleneck in the inheritance of human mitochondrial DNA
B Rebolledo-Jaramillo, MSW Su, N Stoler, JA McElhoe, B Dickins, ...
Proceedings of the National Academy of Sciences 111 (43), 15474-15479, 2014
Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences
DC King, J Taylor, L Elnitski, F Chiaromonte, W Miller, RC Hardison
Genome research 15 (8), 1051-1060, 2005
Envelope models for parsimonious and efficient multivariate linear regression
RD Cook, B Li, F Chiaromonte
Statistica Sinica, 927-960, 2010
Sufficient dimension reduction in regressions with categorical predictors
F Chiaromonte, RD Cook, B Li
The Annals of Statistics, 475-497, 2002
A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome?
A Fungtammasan, E Walsh, F Chiaromonte, KA Eckert, KD Makova
Genome research 22 (6), 993-1005, 2012
Heterogeneity, competition, and macroeconomic dynamics
F Chiaromonte, G Dosi
Structural Change and Economic Dynamics 4 (1), 39-63, 1993
Distinguishing regulatory DNA from neutral sites
L Elnitski, RC Hardison, J Li, S Yang, D Kolbe, P Eswara, MJ O'Connor, ...
Genome Research 13 (1), 64-72, 2003
What is a microsatellite: a computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats
YD Kelkar, N Strubczewski, SE Hile, F Chiaromonte, KA Eckert, ...
Genome biology and evolution 2, 620-635, 2010
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