Damien Eveillard

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Samuel ChaffronLS2N - CNRS UMR 6004 - Nantes UniversityVerified email at univ-nantes.fr
Jérémie BourdonFull Professor, Université de NantesVerified email at univ-nantes.fr
Chris BowlerCNRS Director of Research, IBENS, Paris / President of the Stazione Zoologica Anton Dohrn, NaplesVerified email at biologie.ens.fr
Anne SiegelResearch Director, CNRS, IRISA (Rennes, France)Verified email at irisa.fr
Silvia G. AcinasDepartment of Marine Biology and Oceanography; Institute of Marine Sciences (ICM)-CSICVerified email at icm.csic.es
Lionel GuidiCNRS, Sorbonne University, Laboratoire d'oceanographie de VillefrancheVerified email at imev-mer.fr
Karsenti EricSenior scientist EMBLVerified email at embl.de
Erwan DelageUniversité de Nantes - LS2NVerified email at univ-nantes.fr
Tara OceansInternational Research ConsortiumVerified email at biologie.ens.fr
Shinichi SunagawaETH Zurich; Swiss Institute of BioinformaticsVerified email at ethz.ch
Daniele IudiconeStazione Zoologica Anton DohrnVerified email at szn.it
Matthew B SullivanDistinguished Professor, Ohio State University / Founding Director, Center of Microbiome ScienceVerified email at osu.edu
Abdelhalim LarhlimiUniversité de Nantes - LS2N - CombiVerified email at univ-nantes.fr
Thierry TononCentre for Novel Agricultural Products, Department of Biology, University of YorkVerified email at york.ac.uk
Bess B. WardWilliam J. Sinclair Professor Geosciences, Princeton UniversityVerified email at princeton.edu
Marko BudinichBiomemakers Inc.Verified email at univ-nantes.fr
Fabien Lombardassociate professor, Sorbonne Université, membre Junior 2018 Institut Universitaire de FranceVerified email at obs-vlfr.fr
Alejandro MaassCenter for Mathematical Modeling, University of ChileVerified email at dim.uchile.cl
Sven ThielePotassco Solutions GmbHVerified email at potassco.com
Simon DittamiStation Biologique de RoscoffVerified email at sb-roscoff.fr

Damien Eveillard

Nantes Université, Centrale Nantes, CNRS, LS2N, Université de Nantes

Verified email at univ-nantes.fr - Homepage

Systems Biology Systems Ecology Constraints Microbial Oceanography Computational Biology


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Plankton networks driving carbon export in the oligotrophic ocean L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Nature 532 (7600), 465-470, 2016	791	2016
Tara Oceans: towards global ocean ecosystems biology S Sunagawa, SG Acinas, P Bork, C Bowler, D Eveillard, G Gorsky, L Guidi, ... Nature Reviews Microbiology 18 (8), 428-445, 2020	351	2020
Predictive ecology in a changing world N Mouquet, Y Lagadeuc, V Devictor, L Doyen, A Duputié, D Eveillard, ... Journal of applied ecology 52 (5), 1293-1310, 2015	339	2015
Environmental factors determining ammonia‐oxidizing organism distribution and diversity in marine environments NJ Bouskill, D Eveillard, D Chien, A Jayakumar, BB Ward Environmental microbiology 14 (3), 714-729, 2012	171	2012
Roadmap for naming uncultivated Archaea and Bacteria AE Murray, J Freudenstein, S Gribaldo, R Hatzenpichler, P Hugenholtz, ... Nature microbiology 5 (8), 987-994, 2020	165	2020
Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience D Mandakovic, C Rojas, J Maldonado, M Latorre, D Travisany, E Delage, ... Scientific reports 8 (1), 5875, 2018	151	2018
Beyond the black queen hypothesis A Mas, S Jamshidi, Y Lagadeuc, D Eveillard, P Vandenkoornhuyse The ISME journal 10 (9), 2085-2091, 2016	134	2016
Meneco, a topology-based gap-filling tool applicable to degraded genome-wide metabolic networks S Prigent, C Frioux, SM Dittami, S Thiele, A Larhlimi, G Collet, F Gutknecht, ... PLoS computational biology 13 (1), e1005276, 2017	102	2017
A community perspective on the concept of marine holobionts: current status, challenges, and future directions SM Dittami, E Arboleda, JC Auguet, A Bigalke, E Briand, P Cárdenas, ... PeerJ 9, e10911, 2021	97	2021
Ammonia‐oxidizing bacterial community composition in estuarine and oceanic environments assessed using a functional gene microarray BB Ward, D Eveillard, JD Kirshtein, JD Nelson, MA Voytek, GA Jackson Environmental microbiology 9 (10), 2522-2538, 2007	97	2007
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean M Royo-Llonch, P Sánchez, C Ruiz-González, G Salazar, C Pedrós-Alió, ... Nature Microbiology 6 (12), 1561-1574, 2021	94	2021
Community‐level responses to iron availability in open ocean plankton ecosystems L Caputi, Q Carradec, D Eveillard, A Kirilovsky, E Pelletier, ... Global Biogeochemical Cycles 33 (3), 391-419, 2019	93	2019
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems DJ Richter, R Watteaux, T Vannier, J Leconte, P Frémont, G Reygondeau, ... Elife 11, e78129, 2022	84	2022
A metabolic approach to study algal–bacterial interactions in changing environments SM Dittami, D Eveillard, T Tonon Molecular ecology 23 (7), 1656-1660, 2014	76	2014
Environmental vulnerability of the global ocean epipelagic plankton community interactome S Chaffron, E Delage, M Budinich, D Vintache, N Henry, C Nef, M Ardyna, ... Science Advances 7 (35), eabg1921, 2021	71*	2021
Diversity and ecological footprint of Global Ocean RNA viruses G Dominguez-Huerta, AA Zayed, JM Wainaina, J Guo, F Tian, ... Science 376 (6598), 1202-1208, 2022	61	2022
A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems M Budinich, J Bourdon, A Larhlimi, D Eveillard PloS one 12 (2), e0171744, 2017	57	2017
Evolutionary mechanisms of long-term genome diversification associated with niche partitioning in marine picocyanobacteria H Doré, GK Farrant, U Guyet, J Haguait, F Humily, M Ratin, FD Pitt, ... Frontiers in Microbiology 11, 567431, 2020	56	2020
Decline in plankton diversity and carbon flux with reduced sea ice extent along the Western Antarctic Peninsula Y Lin, C Moreno, A Marchetti, H Ducklow, O Schofield, E Delage, ... Nature Communications 12 (1), 4948, 2021	53	2021
Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome … F Thomas, P Bordron, D Eveillard, G Michel Frontiers in Microbiology 8, 1808, 2017	53	2017

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