| limma powers differential expression analyses for RNA-sequencing and microarray studies ME Ritchie, B Phipson, DI Wu, Y Hu, CW Law, W Shi, GK Smyth Nucleic acids research 43 (7), e47-e47, 2015 | 31594 | 2015 |
| Robust hyperparameter estimation protects against hypervariable genes and improves power to detect differential expression B Phipson, S Lee, IJ Majewski, WS Alexander, GK Smyth Annals of Applied Statistics 10 (2), 946-963, 2016 | 991 | 2016 |
| Splatter: simulation of single-cell RNA sequencing data L Zappia, B Phipson, A Oshlack Genome biology 18 (1), 174, 2017 | 807 | 2017 |
| missMethyl: an R package for analyzing data from Illumina’s HumanMethylation450 platform B Phipson, J Maksimovic, A Oshlack Bioinformatics 32 (2), 286-288, 2015 | 702 | 2015 |
| Pro-inflammatory CD11c+ CD206+ adipose tissue macrophages are associated with insulin resistance in human obesity JM Wentworth, G Naselli, WA Brown, L Doyle, B Phipson, GK Smyth, ... Diabetes 59 (7), 1648, 2010 | 702 | 2010 |
| Permutation P-values Should Never Be Zero: Calculating Exact P-values When Permutations Are Randomly Drawn B Phipson, GK Smyth Statistical Applications in Genetics and Molecular Biology 9 (1), 39, 2010 | 646 | 2010 |
| Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database L Zappia, B Phipson, A Oshlack PLoS computational biology 14 (6), e1006245, 2018 | 299 | 2018 |
| Aire regulates the transfer of antigen from mTECs to dendritic cells for induction of thymic tolerance FX Hubert, SA Kinkel, GM Davey, B Phipson, SN Mueller, A Liston, ... Blood, The Journal of the American Society of Hematology 118 (9), 2462-2472, 2011 | 247 | 2011 |
| Targeting antigen to mouse dendritic cells via Clec9A induces potent CD4 T cell responses biased toward a follicular helper phenotype MH Lahoud, F Ahmet, S Kitsoulis, SS Wan, D Vremec, CN Lee, B Phipson, ... The Journal of Immunology 187 (2), 842-850, 2011 | 245 | 2011 |
| Bcl-2, Bcl-xL, and Bcl-w are not equivalent targets of ABT-737 and navitoclax (ABT-263) in lymphoid and leukemic cells D Mérino, SL Khaw, SP Glaser, DJ Anderson, LD Belmont, C Wong, ... Blood, The Journal of the American Society of Hematology 119 (24), 5807-5816, 2012 | 233 | 2012 |
| Evaluation of variability in human kidney organoids B Phipson, PX Er, AN Combes, TA Forbes, SE Howden, L Zappia, HJ Yen, ... Nature methods 16 (1), 79-87, 2019 | 230 | 2019 |
| A cross-package Bioconductor workflow for analysing methylation array data J Maksimovic, B Phipson, A Oshlack F1000Research 5 (1281), 2016 | 222 | 2016 |
| 3D organoid-derived human glomeruli for personalised podocyte disease modelling and drug screening LJ Hale, SE Howden, B Phipson, A Lonsdale, PX Er, I Ghobrial, S Hosawi, ... Nature communications 9 (1), 5167, 2018 | 206 | 2018 |
| Differentiation of human embryonic stem cells to HOXA+ hemogenic vasculature that resembles the aorta-gonad-mesonephros ES Ng, L Azzola, FF Bruveris, V Calvanese, B Phipson, K Vlahos, C Hirst, ... Nature biotechnology 34 (11), 1168-1179, 2016 | 200 | 2016 |
| Patient-iPSC-derived kidney organoids show functional validation of a ciliopathic renal phenotype and reveal underlying pathogenetic mechanisms TA Forbes, SE Howden, K Lawlor, B Phipson, J Maksimovic, L Hale, ... The American Journal of Human Genetics 102 (5), 816-831, 2018 | 199 | 2018 |
| Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk AN Combes, B Phipson, KT Lawlor, A Dorison, R Patrick, L Zappia, ... Development 146 (12), dev178673, 2019 | 166 | 2019 |
| Opposing roles of polycomb repressive complexes in hematopoietic stem and progenitor cells IJ Majewski, ME Ritchie, B Phipson, J Corbin, M Pakusch, A Ebert, ... Blood, The Journal of the American Society of Hematology 116 (5), 731-739, 2010 | 160 | 2010 |
| STRetch: detecting and discovering pathogenic short tandem repeat expansions H Dashnow, M Lek, B Phipson, A Halman, S Sadedin, A Lonsdale, ... Genome biology 19, 1-13, 2018 | 139 | 2018 |
| Maximal killing of lymphoma cells by DNA damage–inducing therapy requires not only the p53 targets Puma and Noxa, but also Bim L Happo, MS Cragg, B Phipson, JM Haga, ES Jansen, MJ Herold, ... Blood, The Journal of the American Society of Hematology 116 (24), 5256-5267, 2010 | 122 | 2010 |
| Gene set enrichment analysis for genome-wide DNA methylation data J Maksimovic, A Oshlack, B Phipson Genome Biology 22 (1), 173, 2021 | 108 | 2021 |
Gordon K SmythDivision Head, Bioinformatics, Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
