Rhys Farrer
Rhys Farrer
University of Exeter
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Recent introduction of a chytrid fungus endangers Western Palearctic salamanders
A Martel, M Blooi, C Adriaensen, P Van Rooij, W Beukema, MC Fisher, ...
Science 346 (6209), 630-631, 2014
Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage
RA Farrer, LA Weinert, J Bielby, TWJ Garner, F Balloux, F Clare, J Bosch, ...
Proceedings of the National Academy of Sciences 108 (46), 18732-18736, 2011
Recent Asian origin of chytrid fungi causing global amphibian declines
SJ O’hanlon, A Rieux, RA Farrer, GM Rosa, B Waldman, A Bataille, ...
Science 360 (6389), 621-627, 2018
Genome evolution following host jumps in the Irish potato famine pathogen lineage
S Raffaele, RA Farrer, LM Cano, DJ Studholme, D MacLean, M Thines, ...
Science 330 (6010), 1540-1543, 2010
Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen
DEL Cooke, LM Cano, S Raffaele, RA Bain, LR Cooke, GJ Etherington, ...
Public Library of Science 8 (10), e1002940, 2012
Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species
JF Muņoz, L Gade, NA Chow, VN Loparev, P Juieng, EL Berkow, ...
Nature communications 9 (1), 5346, 2018
Ten things to know about oomycete effectors
S Schornack, E Huitema, LM Cano, TO Bozkurt, R Oliva, M Van Damme, ...
Molecular plant pathology 10 (6), 795-803, 2009
Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris
J Rhodes, A Abdolrasouli, RA Farrer, CA Cuomo, DM Aanensen, ...
Emerging microbes & infections 7 (1), 1-12, 2018
Chromosomal copy number variation, selection and uneven rates of recombination reveal cryptic genome diversity linked to pathogenicity
RA Farrer, DA Henk, TWJ Garner, F Balloux, DC Woodhams, MC Fisher
PLoS genetics 9 (8), e1003703, 2013
Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides
JF Muņoz, RA Farrer, CA Desjardins, JE Gallo, S Sykes, S Sakthikumar, ...
MSphere 1 (5), e00213-16, 2016
De novo assembly of the Pseudomonas syringae pv. syringae B728a genome using Illumina/Solexa short sequence reads
RA Farrer, E Kemen, JDG Jones, DJ Studholme
FEMS Microbiology Letters 291 (1), 103-111, 2009
Global analysis of mutations driving microevolution of a heterozygous diploid fungal pathogen
IV Ene, RA Farrer, MP Hirakawa, K Agwamba, CA Cuomo, RJ Bennett
Proceedings of the National Academy of Sciences 115 (37), E8688-E8697, 2018
Hsf1 and Hsp90 orchestrate temperature-dependent global transcriptional remodelling and chromatin architecture in Candida albicans
MD Leach, RA Farrer, K Tan, Z Miao, LA Walker, CA Cuomo, RT Wheeler, ...
Nature communications 7 (1), 11704, 2016
Comparative genomics of Fusarium oxysporum f. sp. melonis reveals the secreted protein recognized by the Fom‐2 resistance gene in melon
SM Schmidt, J Lukasiewicz, R Farrer, P van Dam, C Bertoldo, M Rep
New Phytologist 209 (1), 307-318, 2016
Genome evolution and innovation across the four major lineages of Cryptococcus gattii
RA Farrer, CA Desjardins, S Sakthikumar, S Gujja, S Saif, Q Zeng, Y Chen, ...
MBio 6 (5), e00868-15, 2015
Genomic innovations linked to infection strategies across emerging pathogenic chytrid fungi
RA Farrer, A Martel, E Verbrugghe, A Abouelleil, R Ducatelle, ...
Nature Communications 8 (1), 14742, 2017
Microevolution of Serial Clinical Isolates of Cryptococcus neoformans var. grubii and C. gattii
Y Chen, RA Farrer, C Giamberardino, S Sakthikumar, A Jones, T Yang, ...
MBio 8 (2), e00166-17, 2017
A new lineage of Cryptococcus gattii (VGV) discovered in the Central Zambezian Miombo Woodlands
RA Farrer, M Chang, MJ Davis, L van Dorp, DH Yang, T Shea, TR Sewell, ...
MBio 10 (6), e02306-19, 2019
Nine things genomics can tell us about Candida auris
AD Chybowska, DS Childers, RA Farrer
Frontiers in genetics 11, 351, 2020
Transmission of hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen Cryptococcus gattii
K Voelz, H Ma, S Phadke, EJ Byrnes, P Zhu, O Mueller, RA Farrer, ...
PLoS Genet 9 (9), e1003771, 2013
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