Jared Steranka
Jared Steranka
Johns Hopkins University
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Cited by
Cited by
Mobile interspersed repeats are major structural variants in the human genome
CRL Huang, AM Schneider, Y Lu, T Niranjan, P Shen, MA Robinson, ...
Cell 141 (7), 1171-1182, 2010
Retrotransposon insertions in the clonal evolution of pancreatic ductal adenocarcinoma
N Rodić, JP Steranka, A Makohon-Moore, A Moyer, P Shen, R Sharma, ...
Nature medicine 21 (9), 1060-1064, 2015
Structural variants caused by Alu insertions are associated with risks for many human diseases
LM Payer, JP Steranka, WR Yang, M Kryatova, S Medabalimi, D Ardeljan, ...
Proceedings of the National Academy of Sciences 114 (20), E3984-E3992, 2017
Human transposon insertion profiling: Analysis, visualization and identification of somatic LINE-1 insertions in ovarian cancer
Z Tang, JP Steranka, S Ma, M Grivainis, N Rodić, CRL Huang, IM Shih, ...
Proceedings of the National Academy of Sciences 114 (5), E733-E740, 2017
Cell fitness screens reveal a conflict between LINE-1 retrotransposition and DNA replication
D Ardeljan, JP Steranka, C Liu, Z Li, MS Taylor, LM Payer, M Gorbounov, ...
Nature structural & molecular biology 27 (2), 168-178, 2020
Alu insertion variants alter mRNA splicing
LM Payer, JP Steranka, D Ardeljan, JN Walker, KC Fitzgerald, ...
Nucleic acids research 47 (1), 421-431, 2019
Identification of replication competent murine gammaretroviruses in commonly used prostate cancer cell lines
KS Sfanos, AL Aloia, JL Hicks, DM Esopi, JP Steranka, W Shao, ...
PloS one 6 (6), e20874, 2011
LINE-1 ORF2p expression is nearly imperceptible in human cancers
D Ardeljan, X Wang, M Oghbaie, MS Taylor, D Husband, V Deshpande, ...
Mobile dna 11, 1-19, 2020
Alu insertion variants alter gene transcript levels
LM Payer, JP Steranka, MS Kryatova, G Grillo, M Lupien, PP Rocha, ...
Genome research 31 (12), 2236-2248, 2021
Polymorphic mobile element insertions contribute to gene expression and alternative splicing in human tissues
X Cao, Y Zhang, LM Payer, H Lords, JP Steranka, KH Burns, J Xing
Genome biology 21, 1-19, 2020
Transposon insertion profiling by sequencing (TIPseq) for mapping LINE-1 insertions in the human genome
JP Steranka, Z Tang, M Grivainis, CRL Huang, LM Payer, FOR Rego, ...
Mobile DNA 10, 1-14, 2019
Somatic retrotransposition is infrequent in glioblastomas
P Achanta, JP Steranka, Z Tang, N Rodić, R Sharma, WR Yang, S Ma, ...
Mobile DNA 7, 1-9, 2016
Insertion and deletion polymorphisms of the ancient AluS family in the human genome
MS Kryatova, JP Steranka, KH Burns, LM Payer
Mobile DNA 8, 1-13, 2017
Fine mapping of V (D) J recombinase mediated rearrangements in human lymphoid malignancies
E Halper-Stromberg, J Steranka, N Giraldo-Castillo, T Fuller, S Desiderio, ...
BMC genomics 14, 1-12, 2013
Human transposon insertion profiling by sequencing (TIPseq) to map LINE-1 insertions in single cells
W McKerrow, Z Tang, JP Steranka, LM Payer, JD Boeke, D Keefe, ...
Philosophical Transactions of the Royal Society B 375 (1795), 20190335, 2020
Visualization and probability-based scoring of structural variants within repetitive sequences
E Halper-Stromberg, J Steranka, KH Burns, S Sabunciyan, RA Irizarry
Bioinformatics 30 (11), 1514-1521, 2014
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