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Jared Steranka
Jared Steranka
Johns Hopkins University
Verified email at alumni.jh.edu
Title
Cited by
Cited by
Year
Mobile interspersed repeats are major structural variants in the human genome
CRL Huang, AM Schneider, Y Lu, T Niranjan, P Shen, MA Robinson, ...
Cell 141 (7), 1171-1182, 2010
2982010
Retrotransposon insertions in the clonal evolution of pancreatic ductal adenocarcinoma
N Rodić, JP Steranka, A Makohon-Moore, A Moyer, P Shen, R Sharma, ...
Nature medicine 21 (9), 1060-1064, 2015
1552015
Structural variants caused by Alu insertions are associated with risks for many human diseases
LM Payer, JP Steranka, WR Yang, M Kryatova, S Medabalimi, D Ardeljan, ...
Proceedings of the National Academy of Sciences 114 (20), E3984-E3992, 2017
1322017
Human transposon insertion profiling: Analysis, visualization and identification of somatic LINE-1 insertions in ovarian cancer
Z Tang, JP Steranka, S Ma, M Grivainis, N Rodić, CRL Huang, IM Shih, ...
Proceedings of the National Academy of Sciences 114 (5), E733-E740, 2017
1022017
Cell fitness screens reveal a conflict between LINE-1 retrotransposition and DNA replication
D Ardeljan, JP Steranka, C Liu, Z Li, MS Taylor, LM Payer, M Gorbounov, ...
Nature structural & molecular biology 27 (2), 168-178, 2020
892020
Alu insertion variants alter mRNA splicing
LM Payer, JP Steranka, D Ardeljan, JN Walker, KC Fitzgerald, ...
Nucleic acids research 47 (1), 421-431, 2019
742019
Identification of replication competent murine gammaretroviruses in commonly used prostate cancer cell lines
KS Sfanos, AL Aloia, JL Hicks, DM Esopi, JP Steranka, W Shao, ...
PloS one 6 (6), e20874, 2011
552011
LINE-1 ORF2p expression is nearly imperceptible in human cancers
D Ardeljan, X Wang, M Oghbaie, MS Taylor, D Husband, V Deshpande, ...
Mobile dna 11, 1-19, 2020
542020
Alu insertion variants alter gene transcript levels
LM Payer, JP Steranka, MS Kryatova, G Grillo, M Lupien, PP Rocha, ...
Genome research 31 (12), 2236-2248, 2021
302021
Polymorphic mobile element insertions contribute to gene expression and alternative splicing in human tissues
X Cao, Y Zhang, LM Payer, H Lords, JP Steranka, KH Burns, J Xing
Genome biology 21, 1-19, 2020
302020
Transposon insertion profiling by sequencing (TIPseq) for mapping LINE-1 insertions in the human genome
JP Steranka, Z Tang, M Grivainis, CRL Huang, LM Payer, FOR Rego, ...
Mobile DNA 10, 1-14, 2019
272019
Somatic retrotransposition is infrequent in glioblastomas
P Achanta, JP Steranka, Z Tang, N Rodić, R Sharma, WR Yang, S Ma, ...
Mobile DNA 7, 1-9, 2016
252016
Insertion and deletion polymorphisms of the ancient AluS family in the human genome
MS Kryatova, JP Steranka, KH Burns, LM Payer
Mobile DNA 8, 1-13, 2017
142017
Fine mapping of V (D) J recombinase mediated rearrangements in human lymphoid malignancies
E Halper-Stromberg, J Steranka, N Giraldo-Castillo, T Fuller, S Desiderio, ...
BMC genomics 14, 1-12, 2013
92013
Human transposon insertion profiling by sequencing (TIPseq) to map LINE-1 insertions in single cells
W McKerrow, Z Tang, JP Steranka, LM Payer, JD Boeke, D Keefe, ...
Philosophical Transactions of the Royal Society B 375 (1795), 20190335, 2020
72020
Visualization and probability-based scoring of structural variants within repetitive sequences
E Halper-Stromberg, J Steranka, KH Burns, S Sabunciyan, RA Irizarry
Bioinformatics 30 (11), 1514-1521, 2014
52014
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