Crystal Hepp
Crystal Hepp
Associate Professor in the School of Informatics, Computing, and Cyber Systems, Northern Arizona
Verified email at nau.edu
Title
Cited by
Cited by
Year
NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats
JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ...
Microbial genomics 2 (8), 2016
1302016
Revisiting the evolution of mouse LINE-1 in the genomic era
A Sookdeo, CM Hepp, MA McClure, S Boissinot
Mobile DNA 4 (1), 1-15, 2013
1132013
Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever
DM Engelthaler, CC Roe, CM Hepp, M Teixeira, EM Driebe, JM Schupp, ...
MBio 7 (2), e00550-16, 2016
612016
High Leptospira Diversity in Animals and Humans Complicates the Search for Common Reservoirs of Human Disease in Rural Ecuador
V Barragan, J Chiriboga, E Miller, S Olivas, D Birdsell, C Hepp, ...
PLoS neglected tropical diseases 10 (9), e0004990, 2016
462016
Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus
EM Driebe, JW Sahl, C Roe, JR Bowers, JM Schupp, JD Gillece, E Kelley, ...
PLoS One 10 (7), e0130955, 2015
442015
A Bacillus anthracis genome sequence from the Sverdlovsk 1979 autopsy specimens
JW Sahl, T Pearson, R Okinaka, JM Schupp, JD Gillece, H Heaton, ...
MBio 7 (5), e01501-16, 2016
432016
Genotyping of Burkholderia mallei from an Outbreak of Glanders in Bahrain Suggests Multiple Introduction Events
HC Scholz, T Pearson, H Hornstra, M Projahn, R Terzioglu, R Wernery, ...
PLoS neglected tropical diseases 8 (9), e3195, 2014
392014
The in silico genotyper (ISG): an open-source pipeline to rapidly identify and annotate nucleotide variants for comparative genomics applications
JW Sahl, SM Beckstrom-Sternberg, JS Babic-Sternberg, JD Gillece, ...
bioRxiv, 015578, 2015
372015
Whole genome analysis of injectional anthrax identifies two disease clusters spanning more than 13 years
P Keim, R Grunow, R Vipond, G Grass, A Hoffmaster, DN Birdsell, ...
EBioMedicine 2 (11), 1613-1618, 2015
302015
The Northern Arizona SNP Pipeline (NASP): accurate, flexible, and rapid identification of SNPs in WGS datasets
JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ...
BioRxiv, 037267, 2016
262016
Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague
AJ Vogler, V Andrianaivoarimanana, S Telfer, CM Hall, JW Sahl, ...
PLoS neglected tropical diseases 11 (9), e0005887, 2017
212017
Dating the Cryptococcus gattii dispersal to the North American pacific northwest
CC Roe, J Bowers, H Oltean, E DeBess, PJ Dufresne, S McBurney, ...
Msphere 3 (1), e00499-17, 2018
192018
Automated characterization of potentially active retroid agents in the human genome
MA McClure, HS Richardson, RA Clinton, CM Hepp, BA Crowther, ...
Genomics 85 (4), 512-523, 2005
192005
Local population structure and patterns of western hemisphere dispersal for
DM Engelthaler, CC Roe, CM Hepp, M Teixeira, EM Driebe, JM Schupp, ...
Coccidioides, 2016
162016
Phylogeny of the jacchus group of Callithrix marmosets based on complete mitochondrial genomes
J Malukiewicz, CM Hepp, K Guschanski, AC Stone
American journal of physical anthropology 162 (1), 157-169, 2017
152017
Health disparities and converging epidemics in jail populations: protocol for a mixed-methods study
RT Trotter II, R Camplain, ER Eaves, VY Fofanov, NO Dmitrieva, CM Hepp, ...
JMIR research protocols 7 (10), e10337, 2018
122018
An early pandemic analysis of SARS-CoV-2 population structure and dynamics in Arizona
JT Ladner, BB Larsen, JR Bowers, CM Hepp, E Bolyen, M Folkerts, ...
MBio 11 (5), e02107-20, 2020
112020
Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest
CM Hepp, JH Cocking, M Valentine, SJ Young, D Damian, ...
PloS one 13 (11), e0205801, 2018
102018
Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity
A Fleshman, K Mullins, J Sahl, C Hepp, N Nieto, K Wiggins, H Hornstra, ...
Microbial genomics 4 (9), 2018
102018
Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa
EL Kaufman, NE Stone, GA Scoles, CM Hepp, JD Busch, DM Wagner
Parasites & vectors 11 (1), 1-11, 2018
92018
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Articles 1–20