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Iain MacCallum
Iain MacCallum
Broad Institute
Verified email at broadinstitute.org
Title
Cited by
Cited by
Year
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-18, 2007
22472007
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
S Gnerre, I MacCallum, D Przybylski, FJ Ribeiro, JN Burton, BJ Walker, ...
Proceedings of the National Academy of Sciences 108 (4), 1513-1518, 2011
18842011
ALLPATHS: de novo assembly of whole-genome shotgun microreads
J Butler, I MacCallum, M Kleber, IA Shlyakhter, MK Belmonte, ES Lander, ...
Genome research 18 (5), 810-820, 2008
10862008
The genomic substrate for adaptive radiation in African cichlid fish
D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ...
Nature 513 (7518), 375-381, 2014
9942014
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
Gigascience 2 (1), 2047-217X-2-10, 2013
7882013
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences
TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ...
Nature 447 (7141), 167-177, 2007
7712007
The African coelacanth genome provides insights into tetrapod evolution
CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ...
Nature 496 (7445), 311-316, 2013
7392013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
6302011
Finished bacterial genomes from shotgun sequence data
FJ Ribeiro, D Przybylski, S Yin, T Sharpe, S Gnerre, A Abouelleil, ...
Genome research 22 (11), 2270-2277, 2012
2632012
Comprehensive variation discovery in single human genomes
NI Weisenfeld, S Yin, T Sharpe, B Lau, R Hegarty, L Holmes, B Sogoloff, ...
Nature genetics 46 (12), 1350-1355, 2014
2312014
ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads
DBJ Iain MacCallum, Dariusz Przybylski, Sante Gnerre, Joshua Burton, Ilya ...
Genome biology 10, R103, 2009
229*2009
Processes and systems for nucleic acid sequence assembly
M Schnall-Levin, I MacCallum
US Patent 10,839,939, 2020
1402020
Paired-end sequencing of Fosmid libraries by Illumina
LJS Williams, DG Tabbaa, N Li, AM Berlin, TP Shea, I MacCallum, ...
Genome research 22 (11), 2241-2249, 2012
882012
The measurement and modelling of light scattering by phytoplankton cells at narrow forward angles
I MacCallum, A Cunningham, D McKee
Journal of Optics A: Pure and Applied Optics 6 (7), 698, 2004
172004
Measurement and modelling of phytoplankton light scattering
I MacCallum
University of Strathclyde, 2001
32001
Analysis of the African coelacanth genome sheds light on tetrapod evolution
IB MacCallum
Nature 496 (7445), 311-316, 2013
12013
Systems and methods for nucleic acid sequence assembly
M Schnall-Levin, I MacCallum
US Patent App. 17/411,889, 2022
2022
Systems and methods for nucleic acid sequence assembly
M Schnall-Levin, I MacCallum
US Patent 11,133,084, 2021
2021
Processes and systems for nucleic acid sequence assembly
M Schnall-Levin, I MACCALLUM
2015
Methods and Resources
J Chen, YC Kim, YC Jung, Z Xuan, G Dworkin, Y Zhang, MQ Zhang, ...
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Articles 1–20