Cotranscriptional folding of a riboswitch at nucleotide resolution KE Watters, EJ Strobel, AM Yu, JT Lis, JB Lucks Nature structural & molecular biology 23 (12), 1124-1131, 2016 | 179 | 2016 |
High-throughput determination of RNA structures EJ Strobel, AM Yu, JB Lucks Nature Reviews Genetics 19 (10), 615-634, 2018 | 169 | 2018 |
Characterizing RNA structures in vitro and in vivo with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq) KE Watters, MY Angela, EJ Strobel, AH Settle, JB Lucks Methods 103, 34-48, 2016 | 91 | 2016 |
RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs EJ Strobel, KE Watters, D Loughrey, JB Lucks Current opinion in biotechnology 39, 182-191, 2016 | 65 | 2016 |
A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control EJ Strobel, L Cheng, KE Berman, PD Carlson, JB Lucks Nature chemical biology 15 (11), 1067-1076, 2019 | 56 | 2019 |
Distributed biotin–streptavidin transcription roadblocks for mapping cotranscriptional RNA folding EJ Strobel, KE Watters, Y Nedialkov, I Artsimovitch, JB Lucks Nucleic acids research 45 (12), e109-e109, 2017 | 44 | 2017 |
Two transcription pause elements underlie a σ70-dependent pause cycle EJ Strobel, JW Roberts Proceedings of the National Academy of Sciences 112 (32), E4374-E4380, 2015 | 35 | 2015 |
Regulation of promoter-proximal transcription elongation: Enhanced DNA scrunching drives λQ antiterminator-dependent escape from a σ70-dependent pause EJ Strobel, JW Roberts Nucleic Acids Research 42 (8), 5097-5108, 2014 | 25 | 2014 |
Chemical roadblocking of DNA transcription for nascent RNA display EJ Strobel, JT Lis, JB Lucks Journal of Biological Chemistry 295 (19), 6401-6412, 2020 | 15 | 2020 |
SnapShot: RNA structure probing technologies PD Carlson, ME Evans, MY Angela, EJ Strobel, JB Lucks Cell 175 (2), 600-600. e1, 2018 | 15 | 2018 |
Preparation of E. coli RNA polymerase transcription elongation complexes by selective photoelution from magnetic beads EJ Strobel Journal of Biological Chemistry 297 (1), 2021 | 12 | 2021 |
A universal transcription pause sequence is an element of initiation factor σ70-dependent pausing JG Bird, EJ Strobel, JW Roberts Nucleic Acids Research 44 (14), 6732-6740, 2016 | 10 | 2016 |
Computationally reconstructing cotranscriptional RNA folding pathways from experimental data reveals rearrangement of non-native folding intermediates AM Yu, PM Gasper, EJ Strobel, KE Watters, AA Chen, JB Lucks bioRxiv, 379222, 2018 | 9 | 2018 |
Preparation and Characterization of Internally Modified DNA Templates for Chemical Transcription Roadblocking EJ Strobel Bio-protocol 11 (17), 2021 | 7 | 2021 |
Cotranscriptional RNA Chemical Probing CE Szyjka, EJ Strobel Riboregulator Design and Analysis, 291-330, 2022 | 4 | 2022 |
Purification of synchronized Escherichia coli transcription elongation complexes by reversible immobilization on magnetic beads SL Kelly, CE Szyjka, EJ Strobel Journal of Biological Chemistry 298 (4), 2022 | 3 | 2022 |
Isolation of synchronized E. coli elongation complexes for solid-phase and solution-based in vitro transcription assays EJ Strobel, SL Kelly, CE Szyjka Methods in Enzymology 675, 159-192, 2022 | 2 | 2022 |
Efficient linear dsDNA tagging using deoxyuridine excision EJ Strobel ChemBioChem 22 (22), 3214-3224, 2021 | 2 | 2021 |
Observation of coordinated RNA folding events by systematic cotranscriptional RNA structure probing CE Szyjka, EJ Strobel Nature Communications 14 (1), 7839, 2023 | 1 | 2023 |
Isolation of E. coli RNA polymerase transcription elongation complexes by selective solid-phase photoreversible immobilization EJ Strobel Methods in enzymology 691, 223-250, 2023 | 1 | 2023 |