Genomic Classification of Cutaneous Melanoma Cancer Genome Atlas Network Cell 161 (7), 1681-1696, 2015 | 2831* | 2015 |
An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455-461, 2014 | 2759 | 2014 |
A promoter-level mammalian expression atlas TF Consortium Nature 507 (7493), 462-470, 2014 | 1781 | 2014 |
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles A Mathelier, X Zhao, AW Zhang, F Parcy, R Worsley-Hunt, DJ Arenillas, ... Nucleic acids research 42 (D1), D142-D147, 2014 | 1191 | 2014 |
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles E Portales-Casamar, S Thongjuea, AT Kwon, D Arenillas, X Zhao, ... Nucleic acids research 38 (suppl 1), D105-D110, 2010 | 737 | 2010 |
Identification of driver genes in hepatocellular carcinoma by exome sequencing SP Cleary, WR Jeck, X Zhao, SR Selitsky, GL Savich, TX Tan, MC Wu, ... Hepatology, 2013 | 354 | 2013 |
Polyadenylation site–induced decay of upstream transcripts enforces promoter directionality E Ntini, AI Järvelin, J Bornholdt, Y Chen, M Boyd, M Jørgensen, ... Nature structural & molecular biology 20 (8), 923-928, 2013 | 311 | 2013 |
New histone supply regulates replication fork speed and PCNA unloading J Mejlvang, Y Feng, C Alabert, KJ Neelsen, Z Jasencakova, X Zhao, ... The Journal of cell biology 204 (1), 29-43, 2014 | 167 | 2014 |
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE E Valen, G Pascarella, A Chalk, N Maeda, M Kojima, C Kawazu, M Murata, ... Genome research 19 (2), 255-265, 2009 | 162 | 2009 |
Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes E Valen, P Preker, PR Andersen, X Zhao, Y Chen, C Ender, A Dueck, ... Nature Structural & Molecular Biology 18 (9), 1075-1082, 2011 | 132 | 2011 |
BRPF3‐HBO1 regulates replication origin activation and histone H3K14 acetylation Y Feng, A Vlassis, C Roques, ME Lalonde, C González‐Aguilera, ... The EMBO journal 35 (2), 176-192, 2016 | 122 | 2016 |
Interaction of Antidepressants with the Serotonin and Norepinephrine Transporters MUTATIONAL STUDIES OF THE S1 SUBSTRATE BINDING POCKET L Sørensen, J Andersen, M Thomsen, SMR Hansen, X Zhao, A Sandelin, ... Journal of Biological Chemistry 287 (52), 43694-43707, 2012 | 91 | 2012 |
Systematic clustering of transcription start site landscapes X Zhao, E Valen, BJ Parker, A Sandelin PloS one 6 (8), e23409, 2011 | 71 | 2011 |
Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data Y Chen, M Jorgensen, R Kolde, X Zhao, B Parker, E Valen, J Wen, ... BMC genomics 12 (1), 544, 2011 | 45 | 2011 |
Combined Targeted DNA Sequencing in Non-Small Cell Lung Cancer (NSCLC) Using UNCseq and NGScopy, and RNA Sequencing Using UNCqeR for the Detection of Genetic Aberrations in NSCLC X Zhao, A Wang, V Walter, NM Patel, DA Eberhard, MC Hayward, ... PloS one 10 (6), e0129280, 2015 | 41 | 2015 |
GMD: Measuring the distance between histograms with applications on high-throughput sequencing reads X Zhao, A Sandelin Bioinformatics, 2012 | 16 | 2012 |
Exceptional Chemotherapy Response in Metastatic Colorectal Cancer Associated With Hyper-Indel–Hypermutated Cancer Genome and Comutation of POLD1 and MLH1 MR Sharma, JT Auman, NM Patel, JE Grilley-Olson, X Zhao, SJ Moschos, ... Precision Oncology 1, 1-12, 2017 | 5 | 2017 |
Analysis of the University of North Carolina (UNC) and the Cancer Genome Atlas Project (TCGA) next generation sequencing (NGS) datasets to identify somatic mutations (SM) with … SJ Moschos, X Zhao, DN Hayes Journal of Clinical Oncology 34 (15_suppl), 9557-9557, 2016 | | 2016 |
Whole exome paraffin sequencing (WEPS) of same-patient (pt) primary, extracranial, and melanoma brain metastases (PEB) to identify new driver and clonal evolution genetic events. SJ Moschos, X Zhao, W Liu, DG Trembath, MT Krauze, GV Long, ... Journal of Clinical Oncology 33 (15_suppl), e20033-e20033, 2015 | | 2015 |
On gene regulation in eukaryotes: computational approaches to decipher transcriptional regulation at genetic and epigenetic level X Zhao Bioinformatics Centre, University of Copenhagen, 2012 | | 2012 |